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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
29 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170574484
FLYM01045498
382584
Alphaproteobacteria
CAC
Val
>WENV170574452
FLYM01039846
268154
Alphaproteobacteria
TGT
Thr
>WENV170574410
FLYM01035073
350475
Alphaproteobacteria
GGT
Thr
>WENV170574182
FLYM01011756
59361
Alphaproteobacteria
GAG
Leu
>WENV170574217
FLYM01014535
59361
Alphaproteobacteria
GAG
Leu
>WENV170574396
FLYM01033864
23605
Alphaproteobacteria
CGA
Ser
>WENV170574254
FLYM01018191
428897
Alphaproteobacteria
GCA
Cys
>WENV170574203
FLYM01013287
95928
Alphaproteobacteria
TAG
Leu
>WENV170574456
FLYM01040549
31506
Alphaproteobacteria
TGA
Ser
>WENV170574221
FLYM01014915
108676
Alphaproteobacteria
CAA
Leu
>WENV170574331
FLYM01026500
156543
Alphaproteobacteria
TTT
Lys
>WENV170574471
FLYM01043099
283763
Alphaproteobacteria
TGC
Ala
>WENV170574554
FLYM01058408
97145
Alphaproteobacteria
TAG
Leu
>WENV170574531
FLYM01054411
61017
Alphaproteobacteria
CAG
Leu
>WENV170574126
FLYM01008387
61017
Alphaproteobacteria
CAG
Leu
>WENV170574422
FLYM01036230
339432
Alphaproteobacteria
GTT
Asn
>WENV170574472
FLYM01043101
364533
Alphaproteobacteria
GCC
Gly
>WENV170574457
FLYM01040619
364533
Alphaproteobacteria
GCC
Gly
>WENV170574341
FLYM01027091
364533
Alphaproteobacteria
GCC
Gly
>WENV170574362
FLYM01029272
294513
Alphaproteobacteria
CGT
Thr
>WENV170574521
FLYM01052359
237281
Alphaproteobacteria
CGT
Thr
>WENV170574455
FLYM01040549
10642
Alphaproteobacteria
GCT
Ser
>WENV170574110
FLYM01006364
432316
Alphaproteobacteria
GCA
Cys
>WENV170574569
FLYM01061392
152773
Alphaproteobacteria
GTG
His
>WENV170574299
FLYM01024174
25307
Alphaproteobacteria
GGA
Ser
>WENV170574080
FLYM01003759
96322
Alphaproteobacteria
CAA
Leu
>WENV170574394
FLYM01033534
146817
Alphaproteobacteria
GTG
His
>WENV170574542
FLYM01056187
237439
Alphaproteobacteria
CTT
Lys
>WENV170574388
FLYM01032501
237574
Alphaproteobacteria
TGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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