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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
7 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170577516
FSSH01000106
322721
Betaproteobacteria
TAC
Val
>WENV170578122
FSSH01024714
453013
Betaproteobacteria
CCC
Gly
>WENV170577544
FSSH01000144
160212
Betaproteobacteria
CAT
Met
>WENV170577693
FSSH01000541
369796
Betaproteobacteria
GGT
Thr
>WENV170577525
FSSH01000116
5413
Betaproteobacteria
GCT
Ser
>WENV170577614
FSSH01000274
26328
Betaproteobacteria
TGA
Ser
>WENV170577984
FSSH01004718
159838
Betaproteobacteria
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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