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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
9 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180019294
FTBU01000205
235653
Actinomycetota
CTC
Glu
>WENV180019354
FTBU01001796
417127
Actinomycetota
CCC
Gly
>WENV180019344
FTBU01001572
415620
Actinomycetota
TCC
Gly
>WENV180019311
FTBU01000819
162442
Actinomycetota
GAT
Ile
>WENV180019347
FTBU01001614
146916
Actinomycetota
CGG
Pro
>WENV180019345
FTBU01001572
250719
Actinomycetota
TGG
Pro
>WENV180019360
FTBU01001922
4672
Actinomycetota
GCT
Ser
>WENV180019289
FTBU01000173
270259
Actinomycetota
TTC
Glu
>WENV180019327
FTBU01001157
237559
Actinomycetota
GTG
His
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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