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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
16 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180020759
FTDB01000956
96238
Alphaproteobacteria
GAG
Leu
>WENV180020807
FTDB01002183
96238
Alphaproteobacteria
GAG
Leu
>WENV180020778
FTDB01001494
375044
Alphaproteobacteria
GCC
Gly
>WENV180020817
FTDB01002303
114616
Alphaproteobacteria
GTA
Tyr
>WENV180020768
FTDB01001298
166353
Alphaproteobacteria
ACG
Arg
>WENV180020806
FTDB01002169
166353
Alphaproteobacteria
ACG
Arg
>WENV180020836
FTDB01002646
146818
Alphaproteobacteria
CAT
Met
>WENV180020741
FTDB01000778
244489
Alphaproteobacteria
CTT
Lys
>WENV180020766
FTDB01001258
244489
Alphaproteobacteria
CTT
Lys
>WENV180020834
FTDB01002621
244489
Alphaproteobacteria
CTT
Lys
>WENV180020851
FTDB01002836
244489
Alphaproteobacteria
CTT
Lys
>WENV180020790
FTDB01001873
59118
Alphaproteobacteria
CAG
Leu
>WENV180020727
FTDB01000576
59118
Alphaproteobacteria
CAG
Leu
>WENV180020740
FTDB01000777
97145
Alphaproteobacteria
TAG
Leu
>WENV180020818
FTDB01002303
424918
Alphaproteobacteria
TCC
Gly
>WENV180020801
FTDB01002090
25307
Alphaproteobacteria
GGA
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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