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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
23 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170746557
LUMA01000952
366531
Cyanobacteriota
TTG
Gln
>WENV170746613
LUMA01004516
366531
Cyanobacteriota
TTG
Gln
>WENV170746703
LUMA01013116
267489
Cyanobacteriota
GGC
Ala
>WENV170746527
LUMA01000439
145761
Cyanobacteriota
GTC
Asp
>WENV170746585
LUMA01001948
164907
Cyanobacteriota
GGG
Pro
>WENV170746488
LUMA01000052
37357
Cyanobacteriota
TAA
Leu
>WENV170746679
LUMA01009464
37357
Cyanobacteriota
TAA
Leu
>WENV170746494
LUMA01000091
96363
Cyanobacteriota
TAG
Leu
>WENV170746531
LUMA01000518
149253
Cyanobacteriota
ACG
Arg
>WENV170746719
LUMA01015355
363933
Cyanobacteriota
GTT
Asn
>WENV170746578
LUMA01001716
363933
Cyanobacteriota
GTT
Asn
>WENV170746549
LUMA01000862
23971
Cyanobacteriota
TGA
Ser
>WENV170746693
LUMA01011751
411836
Cyanobacteriota
TCC
Gly
>WENV170746522
LUMA01000229
411836
Cyanobacteriota
TCC
Gly
>WENV170746731
LUMA01016790
252089
Cyanobacteriota
GTG
His
>WENV170746673
LUMA01009264
252089
Cyanobacteriota
GTG
His
>WENV170746587
LUMA01001995
11030
Cyanobacteriota
GCT
Ser
>WENV170746497
LUMA01000102
95762
Cyanobacteriota
AAG
Leu
>WENV170746642
LUMA01006992
188100
Cyanobacteriota
CCG
Arg
>WENV170746492
LUMA01000076
188100
Cyanobacteriota
CCG
Arg
>WENV170746694
LUMA01011882
341034
Cyanobacteriota
GGT
Thr
>WENV170746690
LUMA01011168
341034
Cyanobacteriota
GGT
Thr
>WENV170746521
LUMA01000214
341034
Cyanobacteriota
GGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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