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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
24 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170746703
LUMA01013116
323812
Cyanobacteriota
GGC
Ala
>WENV170746497
LUMA01000102
105782
Cyanobacteriota
AAG
Leu
>WENV170746520
LUMA01000214
108944
Cyanobacteriota
GTA
Tyr
>WENV170746549
LUMA01000862
26565
Cyanobacteriota
TGA
Ser
>WENV170746494
LUMA01000091
105781
Cyanobacteriota
TAG
Leu
>WENV170746527
LUMA01000439
161711
Cyanobacteriota
GTC
Asp
>WENV170746587
LUMA01001995
12337
Cyanobacteriota
GCT
Ser
>WENV170746526
LUMA01000439
258993
Cyanobacteriota
CCA
Trp
>WENV170746531
LUMA01000518
161710
Cyanobacteriota
ACG
Arg
>WENV170746673
LUMA01009264
258996
Cyanobacteriota
GTG
His
>WENV170746731
LUMA01016790
258996
Cyanobacteriota
GTG
His
>WENV170746557
LUMA01000952
375129
Cyanobacteriota
TTG
Gln
>WENV170746613
LUMA01004516
375129
Cyanobacteriota
TTG
Gln
>WENV170746522
LUMA01000229
448924
Cyanobacteriota
TCC
Gly
>WENV170746693
LUMA01011751
448924
Cyanobacteriota
TCC
Gly
>WENV170746578
LUMA01001716
369938
Cyanobacteriota
GTT
Asn
>WENV170746719
LUMA01015355
369938
Cyanobacteriota
GTT
Asn
>WENV170746488
LUMA01000052
41370
Cyanobacteriota
TAA
Leu
>WENV170746679
LUMA01009464
41370
Cyanobacteriota
TAA
Leu
>WENV170746514
LUMA01000174
312476
Cyanobacteriota
TGC
Ala
>WENV170746598
LUMA01002667
165319
Cyanobacteriota
CCT
Arg
>WENV170746521
LUMA01000214
370841
Cyanobacteriota
GGT
Thr
>WENV170746690
LUMA01011168
370841
Cyanobacteriota
GGT
Thr
>WENV170746694
LUMA01011882
370841
Cyanobacteriota
GGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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