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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
11 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170759657
LUMT01000085
166750
Actinomycetota
CAT
Met
>WENV170760576
LUMT01026302
146956
Actinomycetota
CAT
Met
>WENV170759615
LUMT01000033
25937
Actinomycetota
CGA
Ser
>WENV170759614
LUMT01000033
243603
Actinomycetota
ACG
Arg
>WENV170759599
LUMT01000027
45451
Actinomycetota
GGA
Ser
>WENV170759635
LUMT01000056
267252
Actinomycetota
GGT
Thr
>WENV170759567
LUMT01000012
162292
Actinomycetota
GGG
Pro
>WENV170759682
LUMT01000150
146745
Actinomycetota
TGG
Pro
>WENV170759656
LUMT01000084
121525
Actinomycetota
TTG
Gln
>WENV170760546
LUMT01023718
283707
Actinomycetota
CTT
Lys
>WENV170759620
LUMT01000041
243392
Actinomycetota
CGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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