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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
42 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170965079
MTET01001940
165036
Gammaproteobacteria
CCA
Trp
>WENV170965126
MTET01003020
165036
Gammaproteobacteria
CCA
Trp
>WENV170965129
MTET01003053
258852
Gammaproteobacteria
TTT
Lys
>WENV170965068
MTET01001578
235516
Gammaproteobacteria
GTG
His
>WENV170965171
MTET01003740
235516
Gammaproteobacteria
GTG
His
>WENV170965095
MTET01002090
144979
Gammaproteobacteria
CGG
Pro
>WENV170965253
MTET01005614
144979
Gammaproteobacteria
CGG
Pro
>WENV170965139
MTET01003307
195519
Gammaproteobacteria
CAT
Met
>WENV170965169
MTET01003710
195519
Gammaproteobacteria
CAT
Met
>WENV170965057
MTET01001413
152455
Gammaproteobacteria
CAT
Met
>WENV170965143
MTET01003414
44886
Gammaproteobacteria
TGA
Ser
>WENV170965130
MTET01003053
24366
Gammaproteobacteria
GGA
Ser
>WENV170965123
MTET01003012
16446
Gammaproteobacteria
GCT
Ser
>WENV170965026
MTET01000893
144982
Gammaproteobacteria
TGG
Pro
>WENV170965101
MTET01002259
307499
Gammaproteobacteria
GAA
Phe
>WENV170965100
MTET01002259
307499
Gammaproteobacteria
GAA
Phe
>WENV170965036
MTET01000971
307499
Gammaproteobacteria
GAA
Phe
>WENV170965062
MTET01001413
174071
Gammaproteobacteria
ACG
Arg
>WENV170965061
MTET01001413
174071
Gammaproteobacteria
ACG
Arg
>WENV170965087
MTET01002053
144793
Gammaproteobacteria
GAC
Val
>WENV170965077
MTET01001842
95635
Gammaproteobacteria
CAA
Leu
>WENV170965197
MTET01004448
249157
Gammaproteobacteria
TGT
Thr
>WENV170965022
MTET01000707
16242
Gammaproteobacteria
GCT
Ser
>WENV170965233
MTET01004962
62501
Gammaproteobacteria
CAG
Leu
>WENV170965030
MTET01000920
96066
Gammaproteobacteria
TAA
Leu
>WENV170965164
MTET01003566
238510
Gammaproteobacteria
GCC
Gly
>WENV170965092
MTET01002053
238510
Gammaproteobacteria
GCC
Gly
>WENV170965089
MTET01002053
238510
Gammaproteobacteria
GCC
Gly
>WENV170965086
MTET01002041
238510
Gammaproteobacteria
GCC
Gly
>WENV170965090
MTET01002053
413604
Gammaproteobacteria
GCA
Cys
>WENV170965109
MTET01002447
191498
Gammaproteobacteria
CAT
Met
>WENV170965029
MTET01000918
191498
Gammaproteobacteria
CAT
Met
>WENV170965206
MTET01004653
338337
Gammaproteobacteria
CCT
Arg
>WENV170965075
MTET01001804
147595
Gammaproteobacteria
CCT
Arg
>WENV170965116
MTET01002682
145522
Gammaproteobacteria
CCG
Arg
>WENV170965114
MTET01002585
145522
Gammaproteobacteria
CCG
Arg
>WENV170965172
MTET01003845
80625
Gammaproteobacteria
TAA
Leu
>WENV170965005
MTET01000550
238761
Gammaproteobacteria
TAC
Val
>WENV170965195
MTET01004218
152286
Gammaproteobacteria
GAC
Val
>WENV170965045
MTET01001260
152286
Gammaproteobacteria
GAC
Val
>WENV170965259
MTET01005639
145334
Gammaproteobacteria
CCG
Arg
>WENV170965082
MTET01001982
96065
Gammaproteobacteria
TAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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