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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
22 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV171003887
NNBV01003850
412189
Bacteroidota
CCA
Trp
>WENV171003839
NNBV01001744
412189
Bacteroidota
CCA
Trp
>WENV171003848
NNBV01002233
241469
Bacteroidota
GAA
Phe
>WENV171003943
NNBV01004836
241469
Bacteroidota
GAA
Phe
>WENV171003866
NNBV01002980
237606
Bacteroidota
GCC
Gly
>WENV171003829
NNBV01001546
59930
Bacteroidota
GCT
Ser
>WENV171003840
NNBV01001784
156413
Bacteroidota
GGC
Ala
>WENV171003863
NNBV01002683
145155
Bacteroidota
GGC
Ala
>WENV171003838
NNBV01001744
340152
Bacteroidota
GGT
Thr
>WENV171003837
NNBV01001744
113741
Bacteroidota
GTA
Tyr
>WENV171003865
NNBV01002860
146961
Bacteroidota
GTG
His
>WENV171003945
NNBV01004854
159029
Bacteroidota
GTG
His
>WENV171003853
NNBV01002319
199382
Bacteroidota
GTT
Asn
>WENV171003944
NNBV01004836
37199
Bacteroidota
TAA
Leu
>WENV171003867
NNBV01002980
37199
Bacteroidota
TAA
Leu
>WENV171003869
NNBV01003033
251069
Bacteroidota
TCC
Gly
>WENV171003793
NNBV01000869
159146
Bacteroidota
TCG
Arg
>WENV171003831
NNBV01001546
146963
Bacteroidota
TCT
Arg
>WENV171003832
NNBV01001546
146963
Bacteroidota
TCT
Arg
>WENV171003813
NNBV01001126
343008
Bacteroidota
TTC
Glu
>WENV171003812
NNBV01001126
343008
Bacteroidota
TTC
Glu
>WENV171003885
NNBV01003717
239858
Bacteroidota
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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