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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
11 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180117037
OARC01004441
81573
Spirochaetota
TGA
Ser
>WENV180117127
OARC01033178
342550
Spirochaetota
TCC
Gly
>WENV180117050
OARC01007211
151690
Spirochaetota
TCT
Arg
>WENV180117107
OARC01026446
145216
Spirochaetota
CAT
Met
>WENV180117060
OARC01008632
242704
Spirochaetota
GCC
Gly
>WENV180117049
OARC01007211
151712
Spirochaetota
TGG
Pro
>WENV180117051
OARC01007211
151705
Spirochaetota
GTG
His
>WENV180117038
OARC01004441
242697
Spirochaetota
CCT
Arg
>WENV180117075
OARC01012770
45737
Spirochaetota
TAA
Leu
>WENV180117045
OARC01006432
242700
Spirochaetota
GTT
Asn
>WENV180117089
OARC01017210
151718
Spirochaetota
CAT
Met
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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