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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
60 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180150637
OAUN01006042
24650
Bacillota
TAA
Leu
>WENV180150708
OAUN01015141
144612
Bacillota
TCT
Arg
>WENV180150693
OAUN01014597
154063
Bacillota
CGG
Pro
>WENV180150827
OAUN01046418
418445
Bacillota
TCC
Gly
>WENV180150540
OAUN01001812
235098
Bacillota
GAC
Val
>WENV180150546
OAUN01001907
235098
Bacillota
GAC
Val
>WENV180150602
OAUN01004295
235098
Bacillota
GAC
Val
>WENV180150668
OAUN01009976
235098
Bacillota
GAC
Val
>WENV180150433
OAUN01000582
338152
Bacillota
TTC
Glu
>WENV180150554
OAUN01002141
44854
Bacillota
TGA
Ser
>WENV180150847
OAUN01070020
235154
Bacillota
GTT
Asn
>WENV180150646
OAUN01006829
246023
Bacillota
TGC
Ala
>WENV180150610
OAUN01004673
59312
Bacillota
CAG
Leu
>WENV180150593
OAUN01003934
338147
Bacillota
CTC
Glu
>WENV180150667
OAUN01009897
235150
Bacillota
TGC
Ala
>WENV180150765
OAUN01027914
114359
Bacillota
TAG
Leu
>WENV180150706
OAUN01015044
341763
Bacillota
CTC
Glu
>WENV180150821
OAUN01045960
144668
Bacillota
GTC
Asp
>WENV180150775
OAUN01031957
235091
Bacillota
CTT
Lys
>WENV180150530
OAUN01001595
11034
Bacillota
GGA
Ser
>WENV180150852
OAUN01078607
235117
Bacillota
TAC
Val
>WENV180150844
OAUN01063343
247057
Bacillota
TGC
Ala
>WENV180150823
OAUN01046398
235079
Bacillota
GAA
Phe
>WENV180150782
OAUN01034209
235079
Bacillota
GAA
Phe
>WENV180150731
OAUN01021296
235079
Bacillota
GAA
Phe
>WENV180150507
OAUN01001255
338149
Bacillota
CTC
Glu
>WENV180150584
OAUN01003442
245298
Bacillota
CGG
Pro
>WENV180150711
OAUN01015910
152492
Bacillota
GGG
Pro
>WENV180150684
OAUN01013129
153911
Bacillota
GAT
Ile
>WENV180150862
OAUN01078912
144610
Bacillota
GTG
His
>WENV180150863
OAUN01079577
411547
Bacillota
CTG
Gln
>WENV180150583
OAUN01003442
411547
Bacillota
CTG
Gln
>WENV180150555
OAUN01002141
4624
Bacillota
GCT
Ser
>WENV180150585
OAUN01003506
412387
Bacillota
GCA
Cys
>WENV180150856
OAUN01078702
235095
Bacillota
GGT
Thr
>WENV180150700
OAUN01014789
235095
Bacillota
GGT
Thr
>WENV180150621
OAUN01005405
344183
Bacillota
CTG
Gln
>WENV180150826
OAUN01046418
341777
Bacillota
TTC
Glu
>WENV180150630
OAUN01005990
411549
Bacillota
TTG
Gln
>WENV180150748
OAUN01024315
148188
Bacillota
CCG
Arg
>WENV180150720
OAUN01018013
148188
Bacillota
CCG
Arg
>WENV180150809
OAUN01040896
147674
Bacillota
TCT
Arg
>WENV180150824
OAUN01046408
241432
Bacillota
TGT
Thr
>WENV180150688
OAUN01013850
235124
Bacillota
TGG
Pro
>WENV180150586
OAUN01003512
235124
Bacillota
TGG
Pro
>WENV180150742
OAUN01023601
163753
Bacillota
TGG
Pro
>WENV180150485
OAUN01000989
338129
Bacillota
TGT
Thr
>WENV180150780
OAUN01033791
157838
Bacillota
GTC
Asp
>WENV180150609
OAUN01004486
144583
Bacillota
ACG
Arg
>WENV180150839
OAUN01052474
144652
Bacillota
GTC
Asp
>WENV180150822
OAUN01046131
235171
Bacillota
CCA
Trp
>WENV180150698
OAUN01014789
235171
Bacillota
CCA
Trp
>WENV180150571
OAUN01002746
144621
Bacillota
GTT
Asn
>WENV180150508
OAUN01001255
144621
Bacillota
GTT
Asn
>WENV180150539
OAUN01001788
58712
Bacillota
CAG
Leu
>WENV180150766
OAUN01027914
144762
Bacillota
TCT
Arg
>WENV180150506
OAUN01001182
245296
Bacillota
CCC
Gly
>WENV180150425
OAUN01000546
144594
Bacillota
CAC
Val
>WENV180150556
OAUN01002146
249259
Bacillota
GCC
Gly
>WENV180150625
OAUN01005630
338128
Bacillota
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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