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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
49 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180175028
OAWB01003361
235102
Bacteroidota
CGT
Thr
>WENV180174588
OAWB01000031
338155
Bacteroidota
CTC
Glu
>WENV180174791
OAWB01000219
338155
Bacteroidota
CTC
Glu
>WENV180175015
OAWB01002821
95618
Bacteroidota
TAG
Leu
>WENV180174575
OAWB01000022
415410
Bacteroidota
TTG
Gln
>WENV180174833
OAWB01000333
415410
Bacteroidota
TTG
Gln
>WENV180174962
OAWB01001418
411543
Bacteroidota
CTG
Gln
>WENV180174985
OAWB01001673
235182
Bacteroidota
>WENV180174926
OAWB01000861
272983
Bacteroidota
CGT
Thr
>WENV180174805
OAWB01000242
126641
Bacteroidota
TAC
Val
>WENV180174804
OAWB01000242
126641
Bacteroidota
TAC
Val
>WENV180174753
OAWB01000187
338132
Bacteroidota
GCA
Cys
>WENV180174739
OAWB01000159
338132
Bacteroidota
GCA
Cys
>WENV180174574
OAWB01000021
338132
Bacteroidota
GCA
Cys
>WENV180174989
OAWB01001878
144688
Bacteroidota
CAT
Met
>WENV180175087
OAWB01005869
144933
Bacteroidota
TCT
Arg
>WENV180174651
OAWB01000095
144933
Bacteroidota
TCT
Arg
>WENV180174593
OAWB01000035
144933
Bacteroidota
TCT
Arg
>WENV180175134
OAWB01010576
144656
Bacteroidota
GTG
His
>WENV180175074
OAWB01005786
235207
Bacteroidota
CAT
Met
>WENV180175002
OAWB01002366
235207
Bacteroidota
CAT
Met
>WENV180174738
OAWB01000159
144596
Bacteroidota
GGC
Ala
>WENV180175303
OAWB01053160
80607
Bacteroidota
GTA
Tyr
>WENV180174798
OAWB01000235
80607
Bacteroidota
GTA
Tyr
>WENV180174590
OAWB01000033
16999
Bacteroidota
GGA
Ser
>WENV180174585
OAWB01000030
16999
Bacteroidota
GGA
Ser
>WENV180174876
OAWB01000559
144590
Bacteroidota
GTT
Asn
>WENV180175037
OAWB01003840
95559
Bacteroidota
TAG
Leu
>WENV180174879
OAWB01000579
419272
Bacteroidota
CTG
Gln
>WENV180174976
OAWB01001546
338314
Bacteroidota
CCT
Arg
>WENV180174685
OAWB01000122
338165
Bacteroidota
GGT
Thr
>WENV180174554
OAWB01000006
19528
Bacteroidota
GGA
Ser
>WENV180174938
OAWB01000997
50727
Bacteroidota
TGA
Ser
>WENV180174924
OAWB01000819
50727
Bacteroidota
TGA
Ser
>WENV180174822
OAWB01000297
50727
Bacteroidota
TGA
Ser
>WENV180174784
OAWB01000214
50727
Bacteroidota
TGA
Ser
>WENV180174613
OAWB01000053
50727
Bacteroidota
TGA
Ser
>WENV180174589
OAWB01000032
50727
Bacteroidota
TGA
Ser
>WENV180174580
OAWB01000027
50727
Bacteroidota
TGA
Ser
>WENV180174553
OAWB01000006
50727
Bacteroidota
TGA
Ser
>WENV180174881
OAWB01000627
132360
Bacteroidota
GGG
Pro
>WENV180174866
OAWB01000483
132360
Bacteroidota
GGG
Pro
>WENV180174847
OAWB01000383
425638
Bacteroidota
CTG
Gln
>WENV180174764
OAWB01000195
425638
Bacteroidota
CTG
Gln
>WENV180174577
OAWB01000024
425638
Bacteroidota
CTG
Gln
>WENV180174586
OAWB01000031
239647
Bacteroidota
TTT
Lys
>WENV180174581
OAWB01000027
19317
Bacteroidota
GGA
Ser
>WENV180174622
OAWB01000060
338125
Bacteroidota
CCT
Arg
>WENV180174566
OAWB01000014
411629
Bacteroidota
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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