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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
62 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180189780
OAWY01002130
235146
Actinomycetota
CGT
Thr
>WENV180189794
OAWY01002363
119475
Actinomycetota
TAA
Leu
>WENV180189747
OAWY01001568
235347
Actinomycetota
GGC
Ala
>WENV180189748
OAWY01001568
235347
Actinomycetota
GGC
Ala
>WENV180189840
OAWY01003648
37070
Actinomycetota
CGA
Ser
>WENV180189628
OAWY01000717
201717
Actinomycetota
CTT
Lys
>WENV180189806
OAWY01002683
144600
Actinomycetota
TGG
Pro
>WENV180189782
OAWY01002131
158720
Actinomycetota
ACG
Arg
>WENV180189781
OAWY01002131
158720
Actinomycetota
ACG
Arg
>WENV180189691
OAWY01001069
411601
Actinomycetota
CCC
Gly
>WENV180189596
OAWY01000527
144826
Actinomycetota
GGG
Pro
>WENV180189651
OAWY01000795
23370
Actinomycetota
GCT
Ser
>WENV180189745
OAWY01001565
174149
Actinomycetota
GAT
Ile
>WENV180189634
OAWY01000752
338239
Actinomycetota
TTC
Glu
>WENV180189837
OAWY01003547
16219
Actinomycetota
GCT
Ser
>WENV180189766
OAWY01001871
235174
Actinomycetota
TGC
Ala
>WENV180189746
OAWY01001565
235174
Actinomycetota
TGC
Ala
>WENV180189749
OAWY01001605
235101
Actinomycetota
TTT
Lys
>WENV180189645
OAWY01000791
121510
Actinomycetota
TAA
Leu
>WENV180189716
OAWY01001250
356045
Actinomycetota
GAC
Val
>WENV180189708
OAWY01001182
356045
Actinomycetota
GAC
Val
>WENV180189876
OAWY01005490
147732
Actinomycetota
GTC
Asp
>WENV180189686
OAWY01000999
44855
Actinomycetota
TGA
Ser
>WENV180189717
OAWY01001250
235199
Actinomycetota
CAC
Val
>WENV180189709
OAWY01001182
235199
Actinomycetota
CAC
Val
>WENV180189693
OAWY01001077
44862
Actinomycetota
CGA
Ser
>WENV180189740
OAWY01001547
313386
Actinomycetota
CGT
Thr
>WENV180189895
OAWY01006200
198659
Actinomycetota
TAC
Val
>WENV180189776
OAWY01002028
413665
Actinomycetota
TTG
Gln
>WENV180189688
OAWY01001035
254857
Actinomycetota
CCG
Arg
>WENV180189843
OAWY01003764
16223
Actinomycetota
GAG
Leu
>WENV180189818
OAWY01003084
144593
Actinomycetota
TAT
Ile
>WENV180189650
OAWY01000795
144700
Actinomycetota
CAT
Met
>WENV180189831
OAWY01003409
295695
Actinomycetota
CTC
Glu
>WENV180189664
OAWY01000841
295695
Actinomycetota
CTC
Glu
>WENV180189867
OAWY01004939
98279
Actinomycetota
GTA
Tyr
>WENV180189832
OAWY01003409
338148
Actinomycetota
CTG
Gln
>WENV180189665
OAWY01000841
338148
Actinomycetota
CTG
Gln
>WENV180189950
OAWY01013068
235148
Actinomycetota
GTT
Asn
>WENV180189754
OAWY01001678
235148
Actinomycetota
GTT
Asn
>WENV180189647
OAWY01000793
235148
Actinomycetota
GTT
Asn
>WENV180189663
OAWY01000841
53078
Actinomycetota
GGA
Ser
>WENV180189934
OAWY01010365
176456
Actinomycetota
TCT
Arg
>WENV180189753
OAWY01001662
144825
Actinomycetota
CAT
Met
>WENV180189671
OAWY01000904
235348
Actinomycetota
CCT
Arg
>WENV180189890
OAWY01005793
411554
Actinomycetota
CCC
Gly
>WENV180189779
OAWY01002130
113601
Actinomycetota
TAG
Leu
>WENV180189735
OAWY01001502
144595
Actinomycetota
CAA
Leu
>WENV180189862
OAWY01004469
145343
Actinomycetota
GGG
Pro
>WENV180189808
OAWY01002730
235149
Actinomycetota
CCT
Arg
>WENV180189894
OAWY01006070
235121
Actinomycetota
CGT
Thr
>WENV180189875
OAWY01005490
393408
Actinomycetota
TTC
Glu
>WENV180189825
OAWY01003249
144635
Actinomycetota
TGG
Pro
>WENV180189857
OAWY01004251
80622
Actinomycetota
CAG
Leu
>WENV180189865
OAWY01004672
44851
Actinomycetota
TGA
Ser
>WENV180189692
OAWY01001072
16222
Actinomycetota
GAG
Leu
>WENV180189767
OAWY01001871
235173
Actinomycetota
GGC
Ala
>WENV180189861
OAWY01004465
243162
Actinomycetota
GTT
Asn
>WENV180189648
OAWY01000793
243162
Actinomycetota
GTT
Asn
>WENV180189759
OAWY01001723
144660
Actinomycetota
TAC
Val
>WENV180189649
OAWY01000795
95593
Actinomycetota
>WENV180189739
OAWY01001530
144823
Actinomycetota
TCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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