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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
45 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180194912
OAZY01000385
235097
Bacteroidota
TTT
Lys
>WENV180195064
OAZY01001018
235102
Bacteroidota
CGT
Thr
>WENV180194758
OAZY01000110
338155
Bacteroidota
CTC
Glu
>WENV180195300
OAZY01010278
17323
Bacteroidota
GGA
Ser
>WENV180195078
OAZY01001175
436206
Bacteroidota
TTG
Gln
>WENV180195177
OAZY01002607
344692
Bacteroidota
GGT
Thr
>WENV180194775
OAZY01000124
338124
Bacteroidota
CCG
Arg
>WENV180194871
OAZY01000251
126641
Bacteroidota
TAC
Val
>WENV180194870
OAZY01000251
126641
Bacteroidota
TAC
Val
>WENV180194971
OAZY01000523
338132
Bacteroidota
GCA
Cys
>WENV180194556
OAZY01000004
338132
Bacteroidota
GCA
Cys
>WENV180195387
OAZY01040621
193809
Bacteroidota
CAT
Met
>WENV180194746
OAZY01000096
301449
Bacteroidota
CGG
Pro
>WENV180194737
OAZY01000088
301449
Bacteroidota
CGG
Pro
>WENV180194731
OAZY01000081
301449
Bacteroidota
CGG
Pro
>WENV180194843
OAZY01000196
144933
Bacteroidota
TCT
Arg
>WENV180194872
OAZY01000257
141414
Bacteroidota
GGG
Pro
>WENV180194713
OAZY01000061
144656
Bacteroidota
GTG
His
>WENV180194886
OAZY01000300
235207
Bacteroidota
CAT
Met
>WENV180194959
OAZY01000514
80607
Bacteroidota
GTA
Tyr
>WENV180194924
OAZY01000426
80607
Bacteroidota
GTA
Tyr
>WENV180194852
OAZY01000203
80607
Bacteroidota
GTA
Tyr
>WENV180194812
OAZY01000161
16999
Bacteroidota
GGA
Ser
>WENV180195306
OAZY01012440
154643
Bacteroidota
CAT
Met
>WENV180194963
OAZY01000514
144590
Bacteroidota
GTT
Asn
>WENV180194962
OAZY01000514
144590
Bacteroidota
GTT
Asn
>WENV180194862
OAZY01000232
95559
Bacteroidota
TAG
Leu
>WENV180194690
OAZY01000047
144655
Bacteroidota
GGC
Ala
>WENV180194751
OAZY01000101
44852
Bacteroidota
TAA
Leu
>WENV180194960
OAZY01000514
338165
Bacteroidota
GGT
Thr
>WENV180194903
OAZY01000349
338165
Bacteroidota
GGT
Thr
>WENV180194613
OAZY01000021
425638
Bacteroidota
CTG
Gln
>WENV180194583
OAZY01000013
425638
Bacteroidota
CTG
Gln
>WENV180194646
OAZY01000034
19317
Bacteroidota
GGA
Ser
>WENV180194553
OAZY01000004
185921
Bacteroidota
GTC
Asp
>WENV180195287
OAZY01009513
414426
Bacteroidota
CTG
Gln
>WENV180195138
OAZY01001851
55270
Bacteroidota
TGA
Ser
>WENV180194768
OAZY01000116
55270
Bacteroidota
TGA
Ser
>WENV180194712
OAZY01000061
55270
Bacteroidota
TGA
Ser
>WENV180194645
OAZY01000034
55270
Bacteroidota
TGA
Ser
>WENV180194747
OAZY01000099
16224
Bacteroidota
GGA
Ser
>WENV180195096
OAZY01001354
16220
Bacteroidota
GGA
Ser
>WENV180194752
OAZY01000101
338125
Bacteroidota
CCT
Arg
>WENV180194718
OAZY01000067
338125
Bacteroidota
CCT
Arg
>WENV180194974
OAZY01000538
411629
Bacteroidota
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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