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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
15 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180208935
OBAK01000237
186463
Actinomycetota
GAT
Ile
>WENV180209191
OBAK01034933
338763
Actinomycetota
GCC
Gly
>WENV180209088
OBAK01014561
417127
Actinomycetota
CCC
Gly
>WENV180209007
OBAK01004121
338762
Actinomycetota
CTG
Gln
>WENV180209063
OBAK01012454
257634
Actinomycetota
TTT
Lys
>WENV180208937
OBAK01000261
236241
Actinomycetota
TAC
Val
>WENV180208941
OBAK01000386
425058
Actinomycetota
GCA
Cys
>WENV180208970
OBAK01001424
153188
Actinomycetota
CAT
Met
>WENV180209193
OBAK01034933
379302
Actinomycetota
GAC
Val
>WENV180209176
OBAK01029173
245899
Actinomycetota
ACG
Arg
>WENV180209179
OBAK01029626
104906
Actinomycetota
GTA
Tyr
>WENV180209284
OBAK01059368
81941
Actinomycetota
CAG
Leu
>WENV180208942
OBAK01000386
344380
Actinomycetota
GAC
Val
>WENV180208936
OBAK01000237
245559
Actinomycetota
TGC
Ala
>WENV180209070
OBAK01012817
56123
Actinomycetota
GGA
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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