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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
76 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180235242
OBCT01011817
24650
Bacillota
TAA
Leu
>WENV180235132
OBCT01002209
196621
Bacillota
GTC
Asp
>WENV180235312
OBCT01045233
202812
Bacillota
CAT
Met
>WENV180235003
OBCT01000470
309417
Bacillota
GGC
Ala
>WENV180235102
OBCT01001388
309417
Bacillota
GGC
Ala
>WENV180234989
OBCT01000418
144612
Bacillota
TCT
Arg
>WENV180235018
OBCT01000572
235098
Bacillota
GAC
Val
>WENV180235077
OBCT01001045
235098
Bacillota
GAC
Val
>WENV180235212
OBCT01007239
235098
Bacillota
GAC
Val
>WENV180235050
OBCT01000789
340263
Bacillota
TTC
Glu
>WENV180235034
OBCT01000651
340263
Bacillota
TTC
Glu
>WENV180234999
OBCT01000448
44854
Bacillota
TGA
Ser
>WENV180235152
OBCT01002886
425593
Bacillota
CCC
Gly
>WENV180235254
OBCT01016575
37549
Bacillota
TAA
Leu
>WENV180235027
OBCT01000651
148348
Bacillota
GTC
Asp
>WENV180235067
OBCT01000977
304022
Bacillota
GCC
Gly
>WENV180235042
OBCT01000716
304022
Bacillota
GCC
Gly
>WENV180235223
OBCT01008437
193585
Bacillota
CGG
Pro
>WENV180235006
OBCT01000482
239080
Bacillota
CTG
Gln
>WENV180235233
OBCT01010282
238910
Bacillota
CTT
Lys
>WENV180235177
OBCT01004187
243119
Bacillota
CTT
Lys
>WENV180235098
OBCT01001364
16820
Bacillota
GCT
Ser
>WENV180235164
OBCT01003370
293599
Bacillota
CTT
Lys
>WENV180235294
OBCT01033885
152459
Bacillota
GTC
Asp
>WENV180235138
OBCT01002294
144668
Bacillota
GTC
Asp
>WENV180235035
OBCT01000652
429429
Bacillota
CCA
Trp
>WENV180235080
OBCT01001101
313454
Bacillota
GAA
Phe
>WENV180235047
OBCT01000746
11034
Bacillota
GGA
Ser
>WENV180235068
OBCT01000977
235117
Bacillota
TAC
Val
>WENV180235028
OBCT01000651
239076
Bacillota
GAA
Phe
>WENV180235358
OBCT01096075
10943
Bacillota
GGA
Ser
>WENV180234803
OBCT01000058
235697
Bacillota
GTT
Asn
>WENV180235041
OBCT01000716
235079
Bacillota
GAA
Phe
>WENV180235241
OBCT01011456
296878
Bacillota
GTT
Asn
>WENV180234802
OBCT01000058
296878
Bacillota
GTT
Asn
>WENV180235024
OBCT01000620
340265
Bacillota
GCC
Gly
>WENV180234884
OBCT01000174
340265
Bacillota
GCC
Gly
>WENV180235325
OBCT01057253
152513
Bacillota
GAC
Val
>WENV180234895
OBCT01000189
338149
Bacillota
CTC
Glu
>WENV180235022
OBCT01000600
245298
Bacillota
CGG
Pro
>WENV180235313
OBCT01045467
287000
Bacillota
GTT
Asn
>WENV180235251
OBCT01015428
37551
Bacillota
CGA
Ser
>WENV180235296
OBCT01033885
81644
Bacillota
GAG
Leu
>WENV180235023
OBCT01000612
411547
Bacillota
CTG
Gln
>WENV180235021
OBCT01000600
411547
Bacillota
CTG
Gln
>WENV180235000
OBCT01000448
4624
Bacillota
GCT
Ser
>WENV180235081
OBCT01001101
313164
Bacillota
TTT
Lys
>WENV180234963
OBCT01000351
313164
Bacillota
TTT
Lys
>WENV180235133
OBCT01002209
235095
Bacillota
GGT
Thr
>WENV180235130
OBCT01002209
235095
Bacillota
GGT
Thr
>WENV180235253
OBCT01016575
419945
Bacillota
GCA
Cys
>WENV180235355
OBCT01095963
304759
Bacillota
TAC
Val
>WENV180235063
OBCT01000902
304759
Bacillota
TAC
Val
>WENV180235004
OBCT01000470
411549
Bacillota
TTG
Gln
>WENV180235258
OBCT01018186
152045
Bacillota
CAT
Met
>WENV180235354
OBCT01095963
243398
Bacillota
TTC
Glu
>WENV180235213
OBCT01007284
37588
Bacillota
TGA
Ser
>WENV180235222
OBCT01008179
148188
Bacillota
CCG
Arg
>WENV180235159
OBCT01003133
152046
Bacillota
TCT
Arg
>WENV180235101
OBCT01001388
80612
Bacillota
GTA
Tyr
>WENV180235214
OBCT01007658
152051
Bacillota
ACG
Arg
>WENV180235219
OBCT01008134
243401
Bacillota
CGT
Thr
>WENV180234960
OBCT01000351
147674
Bacillota
TCT
Arg
>WENV180235235
OBCT01010803
235124
Bacillota
TGG
Pro
>WENV180234949
OBCT01000340
235124
Bacillota
TGG
Pro
>WENV180234897
OBCT01000190
144583
Bacillota
ACG
Arg
>WENV180235131
OBCT01002209
235171
Bacillota
CCA
Trp
>WENV180235040
OBCT01000715
144621
Bacillota
GTT
Asn
>WENV180234896
OBCT01000189
144621
Bacillota
GTT
Asn
>WENV180235146
OBCT01002603
58712
Bacillota
CAG
Leu
>WENV180234991
OBCT01000418
58712
Bacillota
CAG
Leu
>WENV180235087
OBCT01001206
245296
Bacillota
CCC
Gly
>WENV180235357
OBCT01096047
272992
Bacillota
CTT
Lys
>WENV180235049
OBCT01000789
239078
Bacillota
TTT
Lys
>WENV180235076
OBCT01001042
144594
Bacillota
CAC
Val
>WENV180235190
OBCT01004425
338128
Bacillota
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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