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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
80 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180235904
OBCU01006152
37213
Bacillota
TGA
Ser
>WENV180235753
OBCU01000623
144612
Bacillota
TCT
Arg
>WENV180236083
OBCU01101745
267649
Bacillota
TAC
Val
>WENV180236030
OBCU01047796
246392
Bacillota
GTT
Asn
>WENV180235624
OBCU01000189
235098
Bacillota
GAC
Val
>WENV180235957
OBCU01016506
338152
Bacillota
TTC
Glu
>WENV180235771
OBCU01000687
340263
Bacillota
TTC
Glu
>WENV180235707
OBCU01000388
340263
Bacillota
TTC
Glu
>WENV180235640
OBCU01000217
44854
Bacillota
TGA
Ser
>WENV180235809
OBCU01001164
37549
Bacillota
TAA
Leu
>WENV180235764
OBCU01000687
148348
Bacillota
GTC
Asp
>WENV180236015
OBCU01039490
144577
Bacillota
GAT
Ile
>WENV180235668
OBCU01000271
239080
Bacillota
CTG
Gln
>WENV180235920
OBCU01008639
238910
Bacillota
CTT
Lys
>WENV180235927
OBCU01010615
243119
Bacillota
CTT
Lys
>WENV180235837
OBCU01001537
152047
Bacillota
GGG
Pro
>WENV180235781
OBCU01000759
16820
Bacillota
GCT
Ser
>WENV180235967
OBCU01020868
235137
Bacillota
TGC
Ala
>WENV180235783
OBCU01000777
152512
Bacillota
CCT
Arg
>WENV180236032
OBCU01049886
152459
Bacillota
GTC
Asp
>WENV180235857
OBCU01002218
341763
Bacillota
CTC
Glu
>WENV180235872
OBCU01003032
144668
Bacillota
GTC
Asp
>WENV180235614
OBCU01000187
144668
Bacillota
GTC
Asp
>WENV180236094
OBCU01102253
235091
Bacillota
CTT
Lys
>WENV180235782
OBCU01000773
11034
Bacillota
GGA
Ser
>WENV180236085
OBCU01101771
235117
Bacillota
TAC
Val
>WENV180235765
OBCU01000687
239076
Bacillota
GAA
Phe
>WENV180235884
OBCU01004284
10943
Bacillota
GGA
Ser
>WENV180235882
OBCU01004284
10943
Bacillota
GGA
Ser
>WENV180235575
OBCU01000135
235697
Bacillota
GTT
Asn
>WENV180235828
OBCU01001354
342736
Bacillota
TTG
Gln
>WENV180235661
OBCU01000258
235079
Bacillota
GAA
Phe
>WENV180236034
OBCU01049886
340265
Bacillota
GCC
Gly
>WENV180236029
OBCU01047796
340265
Bacillota
GCC
Gly
>WENV180235761
OBCU01000681
340265
Bacillota
GCC
Gly
>WENV180235571
OBCU01000134
340265
Bacillota
GCC
Gly
>WENV180236014
OBCU01039490
235087
Bacillota
TGC
Ala
>WENV180236002
OBCU01035160
152513
Bacillota
GAC
Val
>WENV180235659
OBCU01000256
338149
Bacillota
CTC
Glu
>WENV180235750
OBCU01000595
245298
Bacillota
CGG
Pro
>WENV180235853
OBCU01001997
37551
Bacillota
CGA
Ser
>WENV180235989
OBCU01029040
81644
Bacillota
GAG
Leu
>WENV180236079
OBCU01100667
413152
Bacillota
TCC
Gly
>WENV180235961
OBCU01017636
411547
Bacillota
CTG
Gln
>WENV180235641
OBCU01000217
4624
Bacillota
GCT
Ser
>WENV180235898
OBCU01005572
235095
Bacillota
GGT
Thr
>WENV180236031
OBCU01047796
344183
Bacillota
CTG
Gln
>WENV180235708
OBCU01000388
239079
Bacillota
TAC
Val
>WENV180235803
OBCU01000982
411549
Bacillota
TTG
Gln
>WENV180236088
OBCU01101933
243398
Bacillota
TTC
Glu
>WENV180235804
OBCU01000997
37588
Bacillota
TGA
Ser
>WENV180235530
OBCU01000084
148188
Bacillota
CCG
Arg
>WENV180235895
OBCU01005383
80612
Bacillota
GTA
Tyr
>WENV180235814
OBCU01001196
80612
Bacillota
GTA
Tyr
>WENV180235636
OBCU01000210
80612
Bacillota
GTA
Tyr
>WENV180235676
OBCU01000280
235127
Bacillota
TTT
Lys
>WENV180235620
OBCU01000187
235127
Bacillota
TTT
Lys
>WENV180235887
OBCU01004573
152051
Bacillota
ACG
Arg
>WENV180235836
OBCU01001530
243401
Bacillota
CGT
Thr
>WENV180235673
OBCU01000280
147674
Bacillota
TCT
Arg
>WENV180235802
OBCU01000981
235124
Bacillota
TGG
Pro
>WENV180236039
OBCU01056964
157838
Bacillota
GTC
Asp
>WENV180235533
OBCU01000084
144583
Bacillota
ACG
Arg
>WENV180236100
OBCU01102769
235171
Bacillota
CCA
Trp
>WENV180235941
OBCU01013352
144621
Bacillota
GTT
Asn
>WENV180235780
OBCU01000757
144621
Bacillota
GTT
Asn
>WENV180235660
OBCU01000256
144621
Bacillota
GTT
Asn
>WENV180235876
OBCU01003412
58712
Bacillota
CAG
Leu
>WENV180235755
OBCU01000623
58712
Bacillota
CAG
Leu
>WENV180235635
OBCU01000210
58712
Bacillota
CAG
Leu
>WENV180235663
OBCU01000258
245296
Bacillota
CCC
Gly
>WENV180235706
OBCU01000388
239078
Bacillota
TTT
Lys
>WENV180235973
OBCU01023290
261708
Bacillota
CCA
Trp
>WENV180235842
OBCU01001684
242686
Bacillota
TGC
Ala
>WENV180235696
OBCU01000352
144594
Bacillota
CAC
Val
>WENV180236099
OBCU01102767
249259
Bacillota
GCC
Gly
>WENV180235776
OBCU01000709
249259
Bacillota
GCC
Gly
>WENV180235662
OBCU01000258
249259
Bacillota
GCC
Gly
>WENV180236064
OBCU01082886
338131
Bacillota
GCC
Gly
>WENV180235532
OBCU01000084
338128
Bacillota
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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