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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
27 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180236848
OBCW01003112
144657
Bacteroidota
CGG
Pro
>WENV180236778
OBCW01000683
243025
Bacteroidota
CAT
Met
>WENV180236897
OBCW01006082
339341
Bacteroidota
GGT
Thr
>WENV180236942
OBCW01013720
338486
Bacteroidota
CAT
Met
>WENV180236839
OBCW01002689
20893
Bacteroidota
GGA
Ser
>WENV180236907
OBCW01006807
237247
Bacteroidota
TTT
Lys
>WENV180236990
OBCW01024079
238121
Bacteroidota
CTT
Lys
>WENV180236826
OBCW01002099
338132
Bacteroidota
GCA
Cys
>WENV180236758
OBCW01000126
235165
Bacteroidota
CCA
Trp
>WENV180236875
OBCW01003826
301449
Bacteroidota
CGG
Pro
>WENV180237050
OBCW01050238
303954
Bacteroidota
GCC
Gly
>WENV180236925
OBCW01010340
144656
Bacteroidota
GTG
His
>WENV180236840
OBCW01002701
144659
Bacteroidota
GTG
His
>WENV180236898
OBCW01006082
235180
Bacteroidota
CCA
Trp
>WENV180236805
OBCW01001517
235180
Bacteroidota
CCA
Trp
>WENV180237089
OBCW01075723
80607
Bacteroidota
GTA
Tyr
>WENV180236884
OBCW01004459
80607
Bacteroidota
GTA
Tyr
>WENV180237061
OBCW01054947
80614
Bacteroidota
>WENV180236922
OBCW01009901
338164
Bacteroidota
TTC
Glu
>WENV180236964
OBCW01017147
139743
Bacteroidota
GGG
Pro
>WENV180237019
OBCW01030915
338165
Bacteroidota
GGT
Thr
>WENV180236773
OBCW01000573
425638
Bacteroidota
CTG
Gln
>WENV180236901
OBCW01006203
19317
Bacteroidota
GGA
Ser
>WENV180236745
OBCW01000103
94703
Bacteroidota
GTA
Tyr
>WENV180237020
OBCW01031117
56823
Bacteroidota
TGA
Ser
>WENV180236837
OBCW01002535
16220
Bacteroidota
GGA
Ser
>WENV180236899
OBCW01006100
338125
Bacteroidota
CCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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