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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
65 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180305436
OBJO01000099
235347
Actinomycetota
GGC
Ala
>WENV180305437
OBJO01000099
235347
Actinomycetota
GGC
Ala
>WENV180305383
OBJO01000018
166493
Actinomycetota
CTT
Lys
>WENV180305499
OBJO01000262
166493
Actinomycetota
CTT
Lys
>WENV180305370
OBJO01000007
144589
Actinomycetota
ACG
Arg
>WENV180305371
OBJO01000007
144589
Actinomycetota
ACG
Arg
>WENV180305394
OBJO01000027
37070
Actinomycetota
CGA
Ser
>WENV180305457
OBJO01000132
144600
Actinomycetota
TGG
Pro
>WENV180305616
OBJO01000979
235194
Actinomycetota
GTG
His
>WENV180306029
OBJO01044819
158720
Actinomycetota
ACG
Arg
>WENV180305386
OBJO01000023
144826
Actinomycetota
GGG
Pro
>WENV180305589
OBJO01000687
23370
Actinomycetota
GCT
Ser
>WENV180305361
OBJO01000001
338239
Actinomycetota
TTC
Glu
>WENV180305368
OBJO01000004
162208
Actinomycetota
TAC
Val
>WENV180305423
OBJO01000070
235174
Actinomycetota
TGC
Ala
>WENV180305400
OBJO01000032
235174
Actinomycetota
TGC
Ala
>WENV180305430
OBJO01000083
235101
Actinomycetota
TTT
Lys
>WENV180305420
OBJO01000061
235101
Actinomycetota
TTT
Lys
>WENV180305408
OBJO01000040
145423
Actinomycetota
TCT
Arg
>WENV180305379
OBJO01000014
145345
Actinomycetota
TAC
Val
>WENV180305418
OBJO01000055
235199
Actinomycetota
CAC
Val
>WENV180305435
OBJO01000099
413665
Actinomycetota
TTG
Gln
>WENV180305385
OBJO01000022
45154
Actinomycetota
TGA
Ser
>WENV180305396
OBJO01000030
254857
Actinomycetota
CCG
Arg
>WENV180305388
OBJO01000024
254857
Actinomycetota
CCG
Arg
>WENV180305588
OBJO01000687
144700
Actinomycetota
CAT
Met
>WENV180305395
OBJO01000027
44942
Actinomycetota
TGA
Ser
>WENV180305404
OBJO01000040
238473
Actinomycetota
GTG
His
>WENV180305596
OBJO01000785
243671
Actinomycetota
CTC
Glu
>WENV180305439
OBJO01000100
98279
Actinomycetota
GTA
Tyr
>WENV180305597
OBJO01000785
338148
Actinomycetota
CTG
Gln
>WENV180305387
OBJO01000023
235148
Actinomycetota
GTT
Asn
>WENV180305364
OBJO01000001
144825
Actinomycetota
CAT
Met
>WENV180305392
OBJO01000026
145347
Actinomycetota
CAA
Leu
>WENV180305366
OBJO01000003
412399
Actinomycetota
CCC
Gly
>WENV180305491
OBJO01000238
119508
Actinomycetota
TAA
Leu
>WENV180305365
OBJO01000001
235348
Actinomycetota
CCT
Arg
>WENV180305438
OBJO01000100
16467
Actinomycetota
GCT
Ser
>WENV180305444
OBJO01000108
411554
Actinomycetota
CCC
Gly
>WENV180305413
OBJO01000053
113601
Actinomycetota
TAG
Leu
>WENV180305376
OBJO01000011
113601
Actinomycetota
TAG
Leu
>WENV180305458
OBJO01000132
144595
Actinomycetota
CAA
Leu
>WENV180305381
OBJO01000016
145343
Actinomycetota
GGG
Pro
>WENV180305369
OBJO01000004
235149
Actinomycetota
CCT
Arg
>WENV180305378
OBJO01000013
145269
Actinomycetota
CAT
Met
>WENV180305412
OBJO01000053
235121
Actinomycetota
CGT
Thr
>WENV180305375
OBJO01000011
235121
Actinomycetota
CGT
Thr
>WENV180305421
OBJO01000061
47164
Actinomycetota
GGA
Ser
>WENV180305533
OBJO01000429
144635
Actinomycetota
TGG
Pro
>WENV180305391
OBJO01000026
119485
Actinomycetota
TAA
Leu
>WENV180305384
OBJO01000022
45852
Actinomycetota
CGA
Ser
>WENV180305445
OBJO01000108
80622
Actinomycetota
CAG
Leu
>WENV180305367
OBJO01000003
80622
Actinomycetota
CAG
Leu
>WENV180305547
OBJO01000468
147734
Actinomycetota
GTC
Asp
>WENV180305545
OBJO01000468
147734
Actinomycetota
GTC
Asp
>WENV180305363
OBJO01000001
147734
Actinomycetota
GTC
Asp
>WENV180305362
OBJO01000001
147734
Actinomycetota
GTC
Asp
>WENV180305471
OBJO01000166
16222
Actinomycetota
GAG
Leu
>WENV180305474
OBJO01000170
235173
Actinomycetota
GGC
Ala
>WENV180305401
OBJO01000032
235173
Actinomycetota
GGC
Ala
>WENV180305419
OBJO01000060
243162
Actinomycetota
GTT
Asn
>WENV180305409
OBJO01000043
243162
Actinomycetota
GTT
Asn
>WENV180305587
OBJO01000687
95593
Actinomycetota
>WENV180305769
OBJO01003585
144823
Actinomycetota
TCT
Arg
>WENV180305504
OBJO01000292
144823
Actinomycetota
TCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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