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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
41 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180331607
OBLC01000025
235097
Bacteroidota
TTT
Lys
>WENV180331751
OBLC01000263
235097
Bacteroidota
TTT
Lys
>WENV180331563
OBLC01000002
235102
Bacteroidota
CGT
Thr
>WENV180331580
OBLC01000008
338155
Bacteroidota
CTC
Glu
>WENV180331568
OBLC01000004
415410
Bacteroidota
TTG
Gln
>WENV180331643
OBLC01000059
338124
Bacteroidota
CCG
Arg
>WENV180331630
OBLC01000055
126641
Bacteroidota
TAC
Val
>WENV180331631
OBLC01000055
126641
Bacteroidota
TAC
Val
>WENV180331780
OBLC01000334
338132
Bacteroidota
GCA
Cys
>WENV180331570
OBLC01000005
338132
Bacteroidota
GCA
Cys
>WENV180331596
OBLC01000016
193809
Bacteroidota
CAT
Met
>WENV180331609
OBLC01000027
144933
Bacteroidota
TCT
Arg
>WENV180331566
OBLC01000003
144656
Bacteroidota
GTG
His
>WENV180331782
OBLC01000347
235207
Bacteroidota
CAT
Met
>WENV180332281
OBLC01131691
80607
Bacteroidota
GTA
Tyr
>WENV180331810
OBLC01000427
80607
Bacteroidota
GTA
Tyr
>WENV180331589
OBLC01000015
80607
Bacteroidota
GTA
Tyr
>WENV180331560
OBLC01000001
80607
Bacteroidota
GTA
Tyr
>WENV180331649
OBLC01000061
113604
Bacteroidota
>WENV180331646
OBLC01000061
113604
Bacteroidota
>WENV180331573
OBLC01000006
16999
Bacteroidota
GGA
Ser
>WENV180331853
OBLC01001035
52358
Bacteroidota
TGA
Ser
>WENV180331811
OBLC01000434
52358
Bacteroidota
TGA
Ser
>WENV180331629
OBLC01000051
52358
Bacteroidota
TGA
Ser
>WENV180331586
OBLC01000014
52358
Bacteroidota
TGA
Ser
>WENV180331595
OBLC01000015
144590
Bacteroidota
GTT
Asn
>WENV180331594
OBLC01000015
144590
Bacteroidota
GTT
Asn
>WENV180331677
OBLC01000096
95559
Bacteroidota
TAG
Leu
>WENV180331601
OBLC01000022
419272
Bacteroidota
CTG
Gln
>WENV180331662
OBLC01000078
144655
Bacteroidota
GGC
Ala
>WENV180331575
OBLC01000007
44852
Bacteroidota
TAA
Leu
>WENV180331603
OBLC01000022
132360
Bacteroidota
GGG
Pro
>WENV180331613
OBLC01000033
425638
Bacteroidota
CTG
Gln
>WENV180331599
OBLC01000018
239647
Bacteroidota
TTT
Lys
>WENV180331578
OBLC01000008
239647
Bacteroidota
TTT
Lys
>WENV180331587
OBLC01000014
19317
Bacteroidota
GGA
Ser
>WENV180331605
OBLC01000024
185921
Bacteroidota
GTC
Asp
>WENV180331567
OBLC01000003
16224
Bacteroidota
GGA
Ser
>WENV180331602
OBLC01000022
16220
Bacteroidota
GGA
Ser
>WENV180331576
OBLC01000007
338125
Bacteroidota
CCT
Arg
>WENV180331604
OBLC01000023
411629
Bacteroidota
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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