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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
22 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180343734
OBLK01074957
146578
Alphaproteobacteria
CGG
Pro
>WENV180344313
OBLK01338336
268460
Alphaproteobacteria
TTT
Lys
>WENV180343343
OBLK01005316
338524
Alphaproteobacteria
CAC
Val
>WENV180344167
OBLK01257028
80827
Alphaproteobacteria
GTA
Tyr
>WENV180343496
OBLK01026277
199776
Alphaproteobacteria
CGG
Pro
>WENV180343834
OBLK01108586
203135
Alphaproteobacteria
TCT
Arg
>WENV180343561
OBLK01036655
185767
Alphaproteobacteria
CCG
Arg
>WENV180344365
OBLK01364809
342732
Alphaproteobacteria
CCC
Gly
>WENV180343435
OBLK01016312
339457
Alphaproteobacteria
>WENV180343434
OBLK01016208
163397
Alphaproteobacteria
TGG
Pro
>WENV180343647
OBLK01053988
236004
Alphaproteobacteria
TTT
Lys
>WENV180343809
OBLK01098699
259565
Alphaproteobacteria
GTT
Asn
>WENV180344219
OBLK01278594
166801
Alphaproteobacteria
TCG
Arg
>WENV180343592
OBLK01043757
338760
Alphaproteobacteria
GAA
Phe
>WENV180344035
OBLK01193204
24348
Alphaproteobacteria
CGA
Ser
>WENV180343417
OBLK01013666
188632
Alphaproteobacteria
GAT
Ile
>WENV180344169
OBLK01257709
23611
Alphaproteobacteria
CGA
Ser
>WENV180344077
OBLK01216604
266073
Alphaproteobacteria
TTT
Lys
>WENV180344122
OBLK01237580
152444
Alphaproteobacteria
GGG
Pro
>WENV180344343
OBLK01353690
166738
Alphaproteobacteria
CCT
Arg
>WENV180343783
OBLK01087728
342846
Alphaproteobacteria
GAC
Val
>WENV180344157
OBLK01250835
418532
Alphaproteobacteria
CTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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