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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
58 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180383631
OBOV01003159
146962
Bacteroidota
CAT
Met
>WENV180383736
OBOV01014332
340811
Bacteroidota
GGT
Thr
>WENV180383770
OBOV01019557
340811
Bacteroidota
GGT
Thr
>WENV180383663
OBOV01005177
238765
Bacteroidota
GCC
Gly
>WENV180383585
OBOV01001016
126691
Bacteroidota
TGG
Pro
>WENV180383692
OBOV01007296
126691
Bacteroidota
TGG
Pro
>WENV180383871
OBOV01053761
126691
Bacteroidota
TGG
Pro
>WENV180383904
OBOV01072891
126691
Bacteroidota
TGG
Pro
>WENV180383749
OBOV01016208
243344
Bacteroidota
TCC
Gly
>WENV180383857
OBOV01047714
243344
Bacteroidota
TCC
Gly
>WENV180384004
OBOV01137123
243344
Bacteroidota
TCC
Gly
>WENV180383555
OBOV01000468
81938
Bacteroidota
GAG
Leu
>WENV180383547
OBOV01000218
154388
Bacteroidota
GTG
His
>WENV180383668
OBOV01005649
338625
Bacteroidota
TTC
Glu
>WENV180383750
OBOV01016330
236125
Bacteroidota
GAA
Phe
>WENV180383595
OBOV01001535
236125
Bacteroidota
GAA
Phe
>WENV180384005
OBOV01137366
127458
Bacteroidota
GAC
Val
>WENV180384010
OBOV01139623
95728
Bacteroidota
GTA
Tyr
>WENV180383560
OBOV01000563
95728
Bacteroidota
GTA
Tyr
>WENV180384014
OBOV01146106
60611
Bacteroidota
GCT
Ser
>WENV180383691
OBOV01007296
60611
Bacteroidota
GCT
Ser
>WENV180383721
OBOV01011348
241347
Bacteroidota
TTG
Gln
>WENV180383693
OBOV01007926
241347
Bacteroidota
TTG
Gln
>WENV180383687
OBOV01006961
338568
Bacteroidota
TTC
Glu
>WENV180384003
OBOV01137123
96418
Bacteroidota
GTA
Tyr
>WENV180383681
OBOV01006232
45519
Bacteroidota
GGA
Ser
>WENV180383554
OBOV01000468
235936
Bacteroidota
TTT
Lys
>WENV180383648
OBOV01004060
127288
Bacteroidota
TGG
Pro
>WENV180383998
OBOV01135464
127414
Bacteroidota
TGG
Pro
>WENV180383733
OBOV01012925
238764
Bacteroidota
>WENV180383753
OBOV01016615
242524
Bacteroidota
GCC
Gly
>WENV180383987
OBOV01123505
341598
Bacteroidota
GCC
Gly
>WENV180383579
OBOV01000947
145271
Bacteroidota
CAT
Met
>WENV180383929
OBOV01090726
343033
Bacteroidota
TTC
Glu
>WENV180383769
OBOV01019557
235935
Bacteroidota
TCC
Gly
>WENV180383761
OBOV01017805
235935
Bacteroidota
TCC
Gly
>WENV180383808
OBOV01029402
95727
Bacteroidota
TAG
Leu
>WENV180383578
OBOV01000866
95727
Bacteroidota
TAG
Leu
>WENV180383849
OBOV01043133
235802
Bacteroidota
CAT
Met
>WENV180383587
OBOV01001137
235802
Bacteroidota
CAT
Met
>WENV180383571
OBOV01000727
235802
Bacteroidota
CAT
Met
>WENV180383567
OBOV01000653
341187
Bacteroidota
TTG
Gln
>WENV180383708
OBOV01009663
145512
Bacteroidota
CAT
Met
>WENV180383679
OBOV01006019
126712
Bacteroidota
GAC
Val
>WENV180383598
OBOV01001622
240684
Bacteroidota
TTT
Lys
>WENV180383765
OBOV01018794
145408
Bacteroidota
TCT
Arg
>WENV180383905
OBOV01072891
145408
Bacteroidota
TCT
Arg
>WENV180384013
OBOV01144796
145555
Bacteroidota
GTC
Asp
>WENV180383757
OBOV01017395
153768
Bacteroidota
TGC
Ala
>WENV180383630
OBOV01003121
153768
Bacteroidota
TGC
Ala
>WENV180383729
OBOV01012473
341465
Bacteroidota
TTC
Glu
>WENV180383683
OBOV01006471
240901
Bacteroidota
TTT
Lys
>WENV180383712
OBOV01010376
145507
Bacteroidota
TCT
Arg
>WENV180383739
OBOV01014663
16286
Bacteroidota
GGA
Ser
>WENV180383695
OBOV01008064
127449
Bacteroidota
TAC
Val
>WENV180383628
OBOV01003071
127449
Bacteroidota
TAC
Val
>WENV180384015
OBOV01148265
127216
Bacteroidota
GGG
Pro
>WENV180384012
OBOV01143556
152405
Bacteroidota
GTT
Asn
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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