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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
59 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180476490
OBYY01000014
235146
Actinomycetota
CGT
Thr
>WENV180476705
OBYY01009105
413566
Actinomycetota
CCC
Gly
>WENV180476475
OBYY01000006
235347
Actinomycetota
GGC
Ala
>WENV180476476
OBYY01000006
235347
Actinomycetota
GGC
Ala
>WENV180476536
OBYY01000027
3239
Actinomycetota
GCT
Ser
>WENV180476467
OBYY01000004
201717
Actinomycetota
CTT
Lys
>WENV180476482
OBYY01000007
235194
Actinomycetota
GTG
His
>WENV180476488
OBYY01000014
273786
Actinomycetota
CGT
Thr
>WENV180476480
OBYY01000006
158720
Actinomycetota
ACG
Arg
>WENV180476479
OBYY01000006
158720
Actinomycetota
ACG
Arg
>WENV180476678
OBYY01004722
158373
Actinomycetota
GGG
Pro
>WENV180476545
OBYY01000049
411601
Actinomycetota
CCC
Gly
>WENV180476554
OBYY01000068
144826
Actinomycetota
GGG
Pro
>WENV180476470
OBYY01000005
23370
Actinomycetota
GCT
Ser
>WENV180476484
OBYY01000008
174149
Actinomycetota
GAT
Ile
>WENV180476618
OBYY01000990
338239
Actinomycetota
TTC
Glu
>WENV180476535
OBYY01000025
338239
Actinomycetota
TTC
Glu
>WENV180476485
OBYY01000008
235174
Actinomycetota
TGC
Ala
>WENV180476616
OBYY01000912
235101
Actinomycetota
TTT
Lys
>WENV180476466
OBYY01000004
235101
Actinomycetota
TTT
Lys
>WENV180476481
OBYY01000007
121510
Actinomycetota
TAA
Leu
>WENV180476531
OBYY01000022
356045
Actinomycetota
GAC
Val
>WENV180476496
OBYY01000019
356045
Actinomycetota
GAC
Val
>WENV180476472
OBYY01000005
44855
Actinomycetota
TGA
Ser
>WENV180476571
OBYY01000524
145345
Actinomycetota
TAC
Val
>WENV180476693
OBYY01008294
235199
Actinomycetota
CAC
Val
>WENV180476532
OBYY01000022
235199
Actinomycetota
CAC
Val
>WENV180476497
OBYY01000019
235199
Actinomycetota
CAC
Val
>WENV180476471
OBYY01000005
44862
Actinomycetota
CGA
Ser
>WENV180476465
OBYY01000004
367535
Actinomycetota
CTG
Gln
>WENV180476580
OBYY01000605
413665
Actinomycetota
TTG
Gln
>WENV180476474
OBYY01000006
413665
Actinomycetota
TTG
Gln
>WENV180476712
OBYY01010584
45154
Actinomycetota
TGA
Ser
>WENV180476494
OBYY01000019
254857
Actinomycetota
CCG
Arg
>WENV180476469
OBYY01000005
144700
Actinomycetota
CAT
Met
>WENV180476464
OBYY01000004
295695
Actinomycetota
CTC
Glu
>WENV180476624
OBYY01001209
235148
Actinomycetota
GTT
Asn
>WENV180476549
OBYY01000065
235148
Actinomycetota
GTT
Asn
>WENV180476548
OBYY01000065
235148
Actinomycetota
GTT
Asn
>WENV180476615
OBYY01000885
53078
Actinomycetota
GGA
Ser
>WENV180476463
OBYY01000004
53078
Actinomycetota
GGA
Ser
>WENV180476537
OBYY01000027
338238
Actinomycetota
CCA
Trp
>WENV180476543
OBYY01000032
144825
Actinomycetota
CAT
Met
>WENV180476628
OBYY01001323
119508
Actinomycetota
TAA
Leu
>WENV180476781
OBYY01032571
235348
Actinomycetota
CCT
Arg
>WENV180476486
OBYY01000009
235348
Actinomycetota
CCT
Arg
>WENV180476489
OBYY01000014
113601
Actinomycetota
TAG
Leu
>WENV180476478
OBYY01000006
144595
Actinomycetota
CAA
Leu
>WENV180476477
OBYY01000006
163764
Actinomycetota
TGG
Pro
>WENV180476710
OBYY01010354
240124
Actinomycetota
CGT
Thr
>WENV180476491
OBYY01000015
17009
Actinomycetota
GAG
Leu
>WENV180476692
OBYY01007836
80622
Actinomycetota
CAG
Leu
>WENV180476735
OBYY01015173
388111
Actinomycetota
>WENV180476547
OBYY01000065
243162
Actinomycetota
GTT
Asn
>WENV180476684
OBYY01005720
344380
Actinomycetota
GAC
Val
>WENV180476487
OBYY01000011
144660
Actinomycetota
TAC
Val
>WENV180476468
OBYY01000005
95593
Actinomycetota
>WENV180476622
OBYY01001180
144823
Actinomycetota
TCT
Arg
>WENV180476459
OBYY01000002
144823
Actinomycetota
TCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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