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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
59 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180477620
OBYZ01002818
339412
Bacteroidota
GGT
Thr
>WENV180477215
OBYZ01000296
144657
Bacteroidota
CGG
Pro
>WENV180477138
OBYZ01000233
97336
Bacteroidota
CAG
Leu
>WENV180476895
OBYZ01000040
338155
Bacteroidota
CTC
Glu
>WENV180476810
OBYZ01000007
339341
Bacteroidota
GGT
Thr
>WENV180476814
OBYZ01000008
58715
Bacteroidota
GAG
Leu
>WENV180477000
OBYZ01000104
46165
Bacteroidota
TGA
Ser
>WENV180476824
OBYZ01000011
95618
Bacteroidota
TAG
Leu
>WENV180476831
OBYZ01000016
338486
Bacteroidota
CAT
Met
>WENV180476797
OBYZ01000005
411543
Bacteroidota
CTG
Gln
>WENV180477048
OBYZ01000136
59689
Bacteroidota
CAG
Leu
>WENV180476813
OBYZ01000008
59689
Bacteroidota
CAG
Leu
>WENV180476893
OBYZ01000039
235182
Bacteroidota
>WENV180476822
OBYZ01000010
272983
Bacteroidota
CGT
Thr
>WENV180477363
OBYZ01000532
235203
Bacteroidota
TTT
Lys
>WENV180477054
OBYZ01000146
235203
Bacteroidota
TTT
Lys
>WENV180476998
OBYZ01000104
238121
Bacteroidota
CTT
Lys
>WENV180476997
OBYZ01000104
238121
Bacteroidota
CTT
Lys
>WENV180477168
OBYZ01000251
126641
Bacteroidota
TAC
Val
>WENV180477167
OBYZ01000251
126641
Bacteroidota
TAC
Val
>WENV180477119
OBYZ01000215
338132
Bacteroidota
GCA
Cys
>WENV180476854
OBYZ01000020
338132
Bacteroidota
GCA
Cys
>WENV180477051
OBYZ01000143
144688
Bacteroidota
CAT
Met
>WENV180476999
OBYZ01000104
45423
Bacteroidota
TGA
Ser
>WENV180476982
OBYZ01000089
37076
Bacteroidota
TAA
Leu
>WENV180476879
OBYZ01000030
181746
Bacteroidota
GGC
Ala
>WENV180476862
OBYZ01000023
58714
Bacteroidota
CAA
Leu
>WENV180476789
OBYZ01000001
144933
Bacteroidota
TCT
Arg
>WENV180477224
OBYZ01000318
235207
Bacteroidota
CAT
Met
>WENV180477118
OBYZ01000213
144659
Bacteroidota
GTG
His
>WENV180477117
OBYZ01000213
144659
Bacteroidota
GTG
His
>WENV180477216
OBYZ01000296
235180
Bacteroidota
CCA
Trp
>WENV180477539
OBYZ01001383
80607
Bacteroidota
GTA
Tyr
>WENV180476890
OBYZ01000035
344769
Bacteroidota
CTC
Glu
>WENV180477111
OBYZ01000205
80614
Bacteroidota
>WENV180476816
OBYZ01000008
80614
Bacteroidota
>WENV180476809
OBYZ01000007
80614
Bacteroidota
>WENV180477139
OBYZ01000233
59182
Bacteroidota
GAG
Leu
>WENV180477038
OBYZ01000132
338164
Bacteroidota
TTC
Glu
>WENV180477037
OBYZ01000132
338164
Bacteroidota
TTC
Glu
>WENV180476863
OBYZ01000023
95875
Bacteroidota
TAG
Leu
>WENV180476830
OBYZ01000015
240012
Bacteroidota
CCC
Gly
>WENV180476829
OBYZ01000015
147439
Bacteroidota
TCT
Arg
>WENV180476853
OBYZ01000020
411550
Bacteroidota
CTG
Gln
>WENV180476852
OBYZ01000020
411550
Bacteroidota
CTG
Gln
>WENV180477201
OBYZ01000279
338165
Bacteroidota
GGT
Thr
>WENV180477536
OBYZ01001324
50727
Bacteroidota
TGA
Ser
>WENV180477236
OBYZ01000344
50727
Bacteroidota
TGA
Ser
>WENV180477218
OBYZ01000303
50727
Bacteroidota
TGA
Ser
>WENV180477154
OBYZ01000241
50727
Bacteroidota
TGA
Ser
>WENV180476798
OBYZ01000005
132360
Bacteroidota
GGG
Pro
>WENV180477143
OBYZ01000235
185921
Bacteroidota
GTC
Asp
>WENV180477142
OBYZ01000235
185921
Bacteroidota
GTC
Asp
>WENV180476851
OBYZ01000020
23696
Bacteroidota
GCT
Ser
>WENV180477010
OBYZ01000111
235129
Bacteroidota
GCC
Gly
>WENV180477008
OBYZ01000111
235129
Bacteroidota
GCC
Gly
>WENV180476812
OBYZ01000008
235129
Bacteroidota
GCC
Gly
>WENV180476927
OBYZ01000061
411629
Bacteroidota
TTG
Gln
>WENV180476901
OBYZ01000046
411629
Bacteroidota
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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