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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
75 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180477361
OBYZ01000516
161400
Bacteroidota
>WENV180476919
OBYZ01000058
371247
Bacteroidota
TTC
Glu
>WENV180476901
OBYZ01000046
448691
Bacteroidota
TTG
Gln
>WENV180476927
OBYZ01000061
448691
Bacteroidota
TTG
Gln
>WENV180476831
OBYZ01000016
369581
Bacteroidota
>WENV180477217
OBYZ01000303
18458
Bacteroidota
GGA
Ser
>WENV180477224
OBYZ01000318
258780
Bacteroidota
>WENV180477117
OBYZ01000213
160416
Bacteroidota
GTG
His
>WENV180477118
OBYZ01000213
160416
Bacteroidota
GTG
His
>WENV180476813
OBYZ01000008
65110
Bacteroidota
CAG
Leu
>WENV180477048
OBYZ01000136
65110
Bacteroidota
CAG
Leu
>WENV180477009
OBYZ01000111
49944
Bacteroidota
TAA
Leu
>WENV180477000
OBYZ01000104
54117
Bacteroidota
TGA
Ser
>WENV180477215
OBYZ01000296
182139
Bacteroidota
CGG
Pro
>WENV180476798
OBYZ01000005
144955
Bacteroidota
GGG
Pro
>WENV180476862
OBYZ01000023
65111
Bacteroidota
CAA
Leu
>WENV180476851
OBYZ01000020
26362
Bacteroidota
GCT
Ser
>WENV180477167
OBYZ01000251
138923
Bacteroidota
TAC
Val
>WENV180477168
OBYZ01000251
138923
Bacteroidota
TAC
Val
>WENV180477116
OBYZ01000212
53123
Bacteroidota
TGA
Ser
>WENV180476895
OBYZ01000040
374505
Bacteroidota
CTC
Glu
>WENV180476893
OBYZ01000039
259302
Bacteroidota
>WENV180477075
OBYZ01000166
193554
Bacteroidota
GTT
Asn
>WENV180477366
OBYZ01000533
262110
Bacteroidota
CGG
Pro
>WENV180477197
OBYZ01000276
261333
Bacteroidota
CCC
Gly
>WENV180476814
OBYZ01000008
71334
Bacteroidota
GAG
Leu
>WENV180476997
OBYZ01000104
259271
Bacteroidota
CTT
Lys
>WENV180477137
OBYZ01000233
259223
Bacteroidota
>WENV180477140
OBYZ01000233
259223
Bacteroidota
>WENV180477002
OBYZ01000106
258204
Bacteroidota
GAA
Phe
>WENV180477364
OBYZ01000533
258204
Bacteroidota
GAA
Phe
>WENV180477049
OBYZ01000136
259272
Bacteroidota
CGT
Thr
>WENV180476827
OBYZ01000012
141365
Bacteroidota
GGG
Pro
>WENV180477457
OBYZ01000882
371246
Bacteroidota
CCT
Arg
>WENV180476999
OBYZ01000104
49945
Bacteroidota
TGA
Ser
>WENV180477045
OBYZ01000136
160417
Bacteroidota
GGC
Ala
>WENV180476998
OBYZ01000104
288732
Bacteroidota
CTT
Lys
>WENV180476852
OBYZ01000020
448600
Bacteroidota
CTG
Gln
>WENV180476853
OBYZ01000020
448600
Bacteroidota
CTG
Gln
>WENV180476890
OBYZ01000035
369490
Bacteroidota
CTC
Glu
>WENV180476812
OBYZ01000008
285851
Bacteroidota
GCC
Gly
>WENV180477008
OBYZ01000111
285851
Bacteroidota
GCC
Gly
>WENV180477010
OBYZ01000111
285851
Bacteroidota
GCC
Gly
>WENV180477154
OBYZ01000241
54039
Bacteroidota
TGA
Ser
>WENV180477218
OBYZ01000303
54039
Bacteroidota
TGA
Ser
>WENV180477236
OBYZ01000344
54039
Bacteroidota
TGA
Ser
>WENV180477536
OBYZ01001324
54039
Bacteroidota
TGA
Ser
>WENV180477284
OBYZ01000402
288453
Bacteroidota
>WENV180477051
OBYZ01000143
160458
Bacteroidota
>WENV180476982
OBYZ01000089
41238
Bacteroidota
TAA
Leu
>WENV180476872
OBYZ01000028
193541
Bacteroidota
GTT
Asn
>WENV180476873
OBYZ01000028
193541
Bacteroidota
GTT
Asn
>WENV180476809
OBYZ01000007
95591
Bacteroidota
GTA
Tyr
>WENV180476816
OBYZ01000008
95591
Bacteroidota
GTA
Tyr
>WENV180477111
OBYZ01000205
95591
Bacteroidota
GTA
Tyr
>WENV180477060
OBYZ01000150
142773
Bacteroidota
TGG
Pro
>WENV180477409
OBYZ01000701
159412
Bacteroidota
GTC
Asp
>WENV180477410
OBYZ01000701
159412
Bacteroidota
GTC
Asp
>WENV180476879
OBYZ01000030
160459
Bacteroidota
GGC
Ala
>WENV180477136
OBYZ01000232
160459
Bacteroidota
GGC
Ala
>WENV180477300
OBYZ01000432
142668
Bacteroidota
TAC
Val
>WENV180477656
OBYZ01004419
142668
Bacteroidota
TAC
Val
>WENV180476968
OBYZ01000079
159414
Bacteroidota
GTG
His
>WENV180476810
OBYZ01000007
369579
Bacteroidota
GGT
Thr
>WENV180476829
OBYZ01000015
160415
Bacteroidota
TCT
Arg
>WENV180476828
OBYZ01000014
448601
Bacteroidota
TTG
Gln
>WENV180477006
OBYZ01000110
277631
Bacteroidota
TTT
Lys
>WENV180477620
OBYZ01002818
369492
Bacteroidota
GGT
Thr
>WENV180477139
OBYZ01000233
64887
Bacteroidota
GAG
Leu
>WENV180477001
OBYZ01000104
18452
Bacteroidota
GGA
Ser
>WENV180477046
OBYZ01000136
18452
Bacteroidota
GGA
Ser
>WENV180476832
OBYZ01000016
30330
Bacteroidota
CGA
Ser
>WENV180476855
OBYZ01000020
371314
Bacteroidota
GCA
Cys
>WENV180477138
OBYZ01000233
105933
Bacteroidota
CAG
Leu
>WENV180476863
OBYZ01000023
105282
Bacteroidota
TAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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