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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
40 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180480006
OBZD01000042
413665
Actinomycetota
TTG
Gln
>WENV180480007
OBZD01000042
144600
Actinomycetota
TGG
Pro
>WENV180480008
OBZD01000042
119508
Actinomycetota
TAA
Leu
>WENV180480009
OBZD01000042
144595
Actinomycetota
CAA
Leu
>WENV180480010
OBZD01000042
235347
Actinomycetota
GGC
Ala
>WENV180480011
OBZD01000042
235347
Actinomycetota
GGC
Ala
>WENV180480012
OBZD01000042
158720
Actinomycetota
ACG
Arg
>WENV180480013
OBZD01000042
158720
Actinomycetota
ACG
Arg
>WENV180480107
OBZD01000108
174149
Actinomycetota
GAT
Ile
>WENV180480108
OBZD01000108
235174
Actinomycetota
TGC
Ala
>WENV180480144
OBZD01000165
145345
Actinomycetota
TAC
Val
>WENV180480150
OBZD01000173
254857
Actinomycetota
CCG
Arg
>WENV180480174
OBZD01000217
235348
Actinomycetota
CCT
Arg
>WENV180480209
OBZD01000292
356045
Actinomycetota
GAC
Val
>WENV180480210
OBZD01000292
235199
Actinomycetota
CAC
Val
>WENV180480211
OBZD01000295
338239
Actinomycetota
TTC
Glu
>WENV180480214
OBZD01000299
235148
Actinomycetota
GTT
Asn
>WENV180480215
OBZD01000301
243671
Actinomycetota
CTC
Glu
>WENV180480216
OBZD01000301
356597
Actinomycetota
CTG
Gln
>WENV180480217
OBZD01000302
95593
Actinomycetota
>WENV180480218
OBZD01000302
144700
Actinomycetota
CAT
Met
>WENV180480219
OBZD01000302
23370
Actinomycetota
GCT
Ser
>WENV180480221
OBZD01000306
144826
Actinomycetota
GGG
Pro
>WENV180480229
OBZD01000315
144823
Actinomycetota
TCT
Arg
>WENV180480282
OBZD01000551
356045
Actinomycetota
GAC
Val
>WENV180480283
OBZD01000551
235199
Actinomycetota
CAC
Val
>WENV180480287
OBZD01000568
16222
Actinomycetota
GAG
Leu
>WENV180480289
OBZD01000576
45154
Actinomycetota
TGA
Ser
>WENV180480290
OBZD01000613
235101
Actinomycetota
TTT
Lys
>WENV180480300
OBZD01000660
235194
Actinomycetota
GTG
His
>WENV180480301
OBZD01000662
412399
Actinomycetota
CCC
Gly
>WENV180480303
OBZD01000672
80622
Actinomycetota
CAG
Leu
>WENV180480330
OBZD01000733
45852
Actinomycetota
CGA
Ser
>WENV180480337
OBZD01000786
166493
Actinomycetota
CTT
Lys
>WENV180480349
OBZD01000908
243162
Actinomycetota
GTT
Asn
>WENV180480350
OBZD01000919
144825
Actinomycetota
CAT
Met
>WENV180480363
OBZD01000991
47164
Actinomycetota
GGA
Ser
>WENV180480377
OBZD01001218
235121
Actinomycetota
CGT
Thr
>WENV180480378
OBZD01001218
113601
Actinomycetota
TAG
Leu
>WENV180480685
OBZD01023926
145269
Actinomycetota
CAT
Met
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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