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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
95 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180479904
OBZD01000001
338155
Bacteroidota
CTC
Glu
>WENV180479906
OBZD01000001
48053
Bacteroidota
TGA
Ser
>WENV180479903
OBZD01000001
23696
Bacteroidota
GCT
Ser
>WENV180479909
OBZD01000002
80607
Bacteroidota
GTA
Tyr
>WENV180479914
OBZD01000003
235203
Bacteroidota
TTT
Lys
>WENV180479913
OBZD01000003
58714
Bacteroidota
CAA
Leu
>WENV180479912
OBZD01000003
95875
Bacteroidota
TAG
Leu
>WENV180479922
OBZD01000006
144933
Bacteroidota
TCT
Arg
>WENV180479925
OBZD01000007
411543
Bacteroidota
CTG
Gln
>WENV180479931
OBZD01000009
16999
Bacteroidota
GGA
Ser
>WENV180479933
OBZD01000010
80607
Bacteroidota
GTA
Tyr
>WENV180479939
OBZD01000010
144590
Bacteroidota
GTT
Asn
>WENV180479938
OBZD01000010
144590
Bacteroidota
GTT
Asn
>WENV180479934
OBZD01000010
338165
Bacteroidota
GGT
Thr
>WENV180479950
OBZD01000016
46165
Bacteroidota
TGA
Ser
>WENV180479953
OBZD01000016
238121
Bacteroidota
CTT
Lys
>WENV180479952
OBZD01000016
238121
Bacteroidota
CTT
Lys
>WENV180479954
OBZD01000016
45423
Bacteroidota
TGA
Ser
>WENV180479956
OBZD01000017
44852
Bacteroidota
TAA
Leu
>WENV180479957
OBZD01000017
338125
Bacteroidota
CCT
Arg
>WENV180479959
OBZD01000018
144933
Bacteroidota
TCT
Arg
>WENV180479962
OBZD01000020
144596
Bacteroidota
GGC
Ala
>WENV180479964
OBZD01000021
155123
Bacteroidota
GTT
Asn
>WENV180479963
OBZD01000021
155123
Bacteroidota
GTT
Asn
>WENV180479966
OBZD01000022
338132
Bacteroidota
GCA
Cys
>WENV180479969
OBZD01000022
144596
Bacteroidota
GGC
Ala
>WENV180479970
OBZD01000026
415410
Bacteroidota
TTG
Gln
>WENV180479972
OBZD01000027
144655
Bacteroidota
GGC
Ala
>WENV180479977
OBZD01000028
235203
Bacteroidota
TTT
Lys
>WENV180479979
OBZD01000028
80614
Bacteroidota
>WENV180479980
OBZD01000029
80607
Bacteroidota
GTA
Tyr
>WENV180479986
OBZD01000033
338125
Bacteroidota
CCT
Arg
>WENV180479991
OBZD01000035
235097
Bacteroidota
TTT
Lys
>WENV180480014
OBZD01000043
411629
Bacteroidota
TTG
Gln
>WENV180480016
OBZD01000044
144656
Bacteroidota
GTG
His
>WENV180480024
OBZD01000047
338486
Bacteroidota
CAT
Met
>WENV180480026
OBZD01000048
48053
Bacteroidota
TGA
Ser
>WENV180480025
OBZD01000048
48053
Bacteroidota
TGA
Ser
>WENV180480029
OBZD01000050
338314
Bacteroidota
CCT
Arg
>WENV180480031
OBZD01000053
338132
Bacteroidota
GCA
Cys
>WENV180480036
OBZD01000054
144657
Bacteroidota
CGG
Pro
>WENV180480033
OBZD01000054
59689
Bacteroidota
CAG
Leu
>WENV180480037
OBZD01000054
235180
Bacteroidota
CCA
Trp
>WENV180480044
OBZD01000058
415410
Bacteroidota
TTG
Gln
>WENV180480046
OBZD01000059
235207
Bacteroidota
CAT
Met
>WENV180480048
OBZD01000060
343138
Bacteroidota
CCT
Arg
>WENV180480053
OBZD01000063
338486
Bacteroidota
CAT
Met
>WENV180480055
OBZD01000065
95618
Bacteroidota
TAG
Leu
>WENV180480058
OBZD01000068
338132
Bacteroidota
GCA
Cys
>WENV180480062
OBZD01000073
411550
Bacteroidota
CTG
Gln
>WENV180480061
OBZD01000073
411550
Bacteroidota
CTG
Gln
>WENV180480065
OBZD01000074
338165
Bacteroidota
GGT
Thr
>WENV180480076
OBZD01000079
343138
Bacteroidota
CCT
Arg
>WENV180480075
OBZD01000079
338164
Bacteroidota
TTC
Glu
>WENV180480074
OBZD01000079
338164
Bacteroidota
TTC
Glu
>WENV180480078
OBZD01000081
144656
Bacteroidota
GTG
His
>WENV180480079
OBZD01000081
16224
Bacteroidota
GGA
Ser
>WENV180480086
OBZD01000086
240012
Bacteroidota
CCC
Gly
>WENV180480091
OBZD01000090
48053
Bacteroidota
TGA
Ser
>WENV180480092
OBZD01000091
147439
Bacteroidota
TCT
Arg
>WENV180480093
OBZD01000092
419272
Bacteroidota
CTG
Gln
>WENV180480094
OBZD01000092
16220
Bacteroidota
GGA
Ser
>WENV180480100
OBZD01000105
339341
Bacteroidota
GGT
Thr
>WENV180480111
OBZD01000115
235182
Bacteroidota
>WENV180480127
OBZD01000133
58715
Bacteroidota
GAG
Leu
>WENV180480126
OBZD01000133
59689
Bacteroidota
CAG
Leu
>WENV180480125
OBZD01000133
235129
Bacteroidota
GCC
Gly
>WENV180480133
OBZD01000146
80607
Bacteroidota
GTA
Tyr
>WENV180480134
OBZD01000147
95559
Bacteroidota
TAG
Leu
>WENV180480138
OBZD01000148
235129
Bacteroidota
GCC
Gly
>WENV180480136
OBZD01000148
235129
Bacteroidota
GCC
Gly
>WENV180480141
OBZD01000149
48053
Bacteroidota
TGA
Ser
>WENV180480148
OBZD01000170
338124
Bacteroidota
CCG
Arg
>WENV180480153
OBZD01000174
267954
Bacteroidota
GCC
Gly
>WENV180480154
OBZD01000174
44852
Bacteroidota
TAA
Leu
>WENV180480157
OBZD01000180
16999
Bacteroidota
GGA
Ser
>WENV180480159
OBZD01000195
338132
Bacteroidota
GCA
Cys
>WENV180480161
OBZD01000195
23696
Bacteroidota
GCT
Ser
>WENV180480170
OBZD01000213
113604
Bacteroidota
>WENV180480167
OBZD01000213
113604
Bacteroidota
>WENV180480172
OBZD01000215
126966
Bacteroidota
TAC
Val
>WENV180480173
OBZD01000215
126966
Bacteroidota
TAC
Val
>WENV180480175
OBZD01000218
235207
Bacteroidota
CAT
Met
>WENV180480193
OBZD01000254
235102
Bacteroidota
CGT
Thr
>WENV180480201
OBZD01000265
48053
Bacteroidota
TGA
Ser
>WENV180480205
OBZD01000277
144659
Bacteroidota
GTG
His
>WENV180480204
OBZD01000277
144659
Bacteroidota
GTG
His
>WENV180480254
OBZD01000415
338155
Bacteroidota
CTC
Glu
>WENV180480255
OBZD01000417
144688
Bacteroidota
CAT
Met
>WENV180480269
OBZD01000475
80614
Bacteroidota
>WENV180480276
OBZD01000531
126965
Bacteroidota
GGG
Pro
>WENV180480293
OBZD01000617
267954
Bacteroidota
GCC
Gly
>WENV180480346
OBZD01000903
24174
Bacteroidota
GCT
Ser
>WENV180480358
OBZD01000979
267954
Bacteroidota
GCC
Gly
>WENV180480361
OBZD01000979
267954
Bacteroidota
GCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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