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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
32 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180648884
OCSJ01165102
235097
Bacteroidota
TTT
Lys
>WENV180648366
OCSJ01001072
339412
Bacteroidota
GGT
Thr
>WENV180648410
OCSJ01008334
339341
Bacteroidota
GGT
Thr
>WENV180648611
OCSJ01053511
58715
Bacteroidota
GAG
Leu
>WENV180649082
OCSJ01310598
58715
Bacteroidota
GAG
Leu
>WENV180648567
OCSJ01047376
46165
Bacteroidota
TGA
Ser
>WENV180648610
OCSJ01053511
59689
Bacteroidota
CAG
Leu
>WENV180648958
OCSJ01211524
235203
Bacteroidota
TTT
Lys
>WENV180649099
OCSJ01311565
238121
Bacteroidota
CTT
Lys
>WENV180648394
OCSJ01005770
338132
Bacteroidota
GCA
Cys
>WENV180649068
OCSJ01304291
193809
Bacteroidota
CAT
Met
>WENV180648349
OCSJ01000034
235165
Bacteroidota
CCA
Trp
>WENV180648393
OCSJ01005421
301449
Bacteroidota
CGG
Pro
>WENV180648950
OCSJ01203145
235207
Bacteroidota
CAT
Met
>WENV180648417
OCSJ01012224
235180
Bacteroidota
CCA
Trp
>WENV180648954
OCSJ01208237
80607
Bacteroidota
GTA
Tyr
>WENV180648409
OCSJ01008334
80607
Bacteroidota
GTA
Tyr
>WENV180648391
OCSJ01004543
80607
Bacteroidota
GTA
Tyr
>WENV180648693
OCSJ01079514
113604
Bacteroidota
>WENV180648765
OCSJ01103917
344769
Bacteroidota
CTC
Glu
>WENV180648923
OCSJ01179606
16999
Bacteroidota
GGA
Ser
>WENV180648551
OCSJ01043715
338164
Bacteroidota
TTC
Glu
>WENV180648793
OCSJ01112547
150485
Bacteroidota
GTT
Asn
>WENV180649087
OCSJ01310948
411550
Bacteroidota
CTG
Gln
>WENV180648411
OCSJ01008805
132360
Bacteroidota
GGG
Pro
>WENV180648868
OCSJ01148699
353927
Bacteroidota
TTC
Glu
>WENV180648634
OCSJ01059524
353927
Bacteroidota
TTC
Glu
>WENV180648875
OCSJ01156786
146530
Bacteroidota
TGT
Thr
>WENV180649092
OCSJ01311126
146764
Bacteroidota
GTC
Asp
>WENV180648637
OCSJ01060033
16220
Bacteroidota
GGA
Ser
>WENV180648729
OCSJ01091800
235129
Bacteroidota
GCC
Gly
>WENV180648609
OCSJ01053511
235129
Bacteroidota
GCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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