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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
37 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180689046
OCZA010474738
149035
Gammaproteobacteria
CCG
Arg
>WENV180687159
OCZA010001323
244202
Gammaproteobacteria
TTT
Lys
>WENV180689103
OCZA010529592
61925
Gammaproteobacteria
TAA
Leu
>WENV180689514
OCZA011006624
61925
Gammaproteobacteria
TAA
Leu
>WENV180687426
OCZA010005173
241476
Gammaproteobacteria
TTT
Lys
>WENV180689455
OCZA010932130
160030
Gammaproteobacteria
GGG
Pro
>WENV180688120
OCZA010056141
46594
Gammaproteobacteria
GGA
Ser
>WENV180689373
OCZA010822735
145367
Gammaproteobacteria
GGG
Pro
>WENV180688121
OCZA010056309
147647
Gammaproteobacteria
CAT
Met
>WENV180688252
OCZA010074566
240619
Gammaproteobacteria
TGT
Thr
>WENV180687474
OCZA010006359
154268
Gammaproteobacteria
ACG
Arg
>WENV180686976
OCZA010000165
240642
Gammaproteobacteria
GTT
Asn
>WENV180686948
OCZA010000078
240642
Gammaproteobacteria
GTT
Asn
>WENV180688848
OCZA010310239
149036
Gammaproteobacteria
CCA
Trp
>WENV180687884
OCZA010028062
245602
Gammaproteobacteria
TTT
Lys
>WENV180688002
OCZA010040645
148148
Gammaproteobacteria
GAC
Val
>WENV180689408
OCZA010881194
161409
Gammaproteobacteria
GGG
Pro
>WENV180689002
OCZA010435316
270709
Gammaproteobacteria
GTG
His
>WENV180688756
OCZA010257541
243895
Gammaproteobacteria
>WENV180689296
OCZA010720800
199268
Gammaproteobacteria
ACG
Arg
>WENV180687066
OCZA010000587
199268
Gammaproteobacteria
ACG
Arg
>WENV180689048
OCZA010476962
252289
Gammaproteobacteria
TTT
Lys
>WENV180688505
OCZA010137826
411766
Gammaproteobacteria
GCA
Cys
>WENV180687781
OCZA010020341
294663
Gammaproteobacteria
TTC
Glu
>WENV180689417
OCZA010893700
59830
Gammaproteobacteria
CAA
Leu
>WENV180689265
OCZA010692928
165387
Gammaproteobacteria
CCT
Arg
>WENV180689084
OCZA010513663
411842
Gammaproteobacteria
GCA
Cys
>WENV180689092
OCZA010520324
147123
Gammaproteobacteria
CAT
Met
>WENV180687725
OCZA010017017
128930
Gammaproteobacteria
GTC
Asp
>WENV180687464
OCZA010006087
237421
Gammaproteobacteria
TGT
Thr
>WENV180689371
OCZA010821784
149037
Gammaproteobacteria
GAC
Val
>WENV180687295
OCZA010002935
198797
Gammaproteobacteria
TGG
Pro
>WENV180689583
OCZA011074464
190809
Gammaproteobacteria
GGG
Pro
>WENV180688751
OCZA010254714
190809
Gammaproteobacteria
GGG
Pro
>WENV180688458
OCZA010123853
190809
Gammaproteobacteria
GGG
Pro
>WENV180687864
OCZA010025526
190809
Gammaproteobacteria
GGG
Pro
>WENV180687302
OCZA010003010
73305
Gammaproteobacteria
TAA
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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