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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
29 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180697362
ODDE01000082
81880
Gammaproteobacteria
GAG
Leu
>WENV180698094
ODDE01031995
81880
Gammaproteobacteria
GAG
Leu
>WENV180697609
ODDE01001735
340342
Gammaproteobacteria
TTG
Gln
>WENV180697610
ODDE01001735
340342
Gammaproteobacteria
TTG
Gln
>WENV180697784
ODDE01004721
238438
Gammaproteobacteria
>WENV180697902
ODDE01009780
3276
Gammaproteobacteria
>WENV180697426
ODDE01000375
145168
Gammaproteobacteria
CAT
Met
>WENV180697466
ODDE01000636
145168
Gammaproteobacteria
CAT
Met
>WENV180697392
ODDE01000208
23665
Gammaproteobacteria
>WENV180697940
ODDE01012500
150561
Gammaproteobacteria
ACG
Arg
>WENV180697977
ODDE01015895
413551
Gammaproteobacteria
CCA
Trp
>WENV180698100
ODDE01033682
339913
Gammaproteobacteria
TTT
Lys
>WENV180698075
ODDE01029337
254333
Gammaproteobacteria
TGT
Thr
>WENV180697574
ODDE01001484
58828
Gammaproteobacteria
TAA
Leu
>WENV180697534
ODDE01001087
58828
Gammaproteobacteria
TAA
Leu
>WENV180697515
ODDE01000985
58828
Gammaproteobacteria
TAA
Leu
>WENV180698078
ODDE01029337
254172
Gammaproteobacteria
GGT
Thr
>WENV180697436
ODDE01000413
3278
Gammaproteobacteria
>WENV180697427
ODDE01000378
3278
Gammaproteobacteria
>WENV180697382
ODDE01000198
147498
Gammaproteobacteria
GAC
Val
>WENV180697476
ODDE01000688
148834
Gammaproteobacteria
CAT
Met
>WENV180697465
ODDE01000633
148834
Gammaproteobacteria
CAT
Met
>WENV180697415
ODDE01000306
148834
Gammaproteobacteria
CAT
Met
>WENV180697439
ODDE01000421
147761
Gammaproteobacteria
TGG
Pro
>WENV180697348
ODDE01000033
147761
Gammaproteobacteria
TGG
Pro
>WENV180697435
ODDE01000403
152293
Gammaproteobacteria
ACG
Arg
>WENV180697834
ODDE01006580
97795
Gammaproteobacteria
GTA
Tyr
>WENV180697643
ODDE01002041
147499
Gammaproteobacteria
CTT
Lys
>WENV180697638
ODDE01002006
147499
Gammaproteobacteria
CTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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