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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
30 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180697609
ODDE01001735
380516
Gammaproteobacteria
TTG
Gln
>WENV180697610
ODDE01001735
380516
Gammaproteobacteria
TTG
Gln
>WENV180697930
ODDE01010889
380516
Gammaproteobacteria
TTG
Gln
>WENV180697515
ODDE01000985
65399
Gammaproteobacteria
TAA
Leu
>WENV180697534
ODDE01001087
65399
Gammaproteobacteria
TAA
Leu
>WENV180697574
ODDE01001484
65399
Gammaproteobacteria
TAA
Leu
>WENV180697392
ODDE01000208
26269
Gammaproteobacteria
>WENV180697836
ODDE01006580
278890
Gammaproteobacteria
GGT
Thr
>WENV180697348
ODDE01000033
159483
Gammaproteobacteria
TGG
Pro
>WENV180697439
ODDE01000421
159483
Gammaproteobacteria
TGG
Pro
>WENV180697435
ODDE01000403
180182
Gammaproteobacteria
ACG
Arg
>WENV180697810
ODDE01005570
29742
Gammaproteobacteria
GGA
Ser
>WENV180698100
ODDE01033682
370971
Gammaproteobacteria
TTT
Lys
>WENV180697449
ODDE01000490
91316
Gammaproteobacteria
CAA
Leu
>WENV180697356
ODDE01000065
279221
Gammaproteobacteria
GAA
Phe
>WENV180697702
ODDE01003241
279221
Gammaproteobacteria
GAA
Phe
>WENV180697736
ODDE01003607
279221
Gammaproteobacteria
GAA
Phe
>WENV180697700
ODDE01003152
108473
Gammaproteobacteria
TAG
Leu
>WENV180697466
ODDE01000636
177740
Gammaproteobacteria
>WENV180698076
ODDE01029337
108957
Gammaproteobacteria
GTA
Tyr
>WENV180697426
ODDE01000375
179686
Gammaproteobacteria
>WENV180697607
ODDE01001735
159358
Gammaproteobacteria
CAT
Met
>WENV180697427
ODDE01000378
3819
Gammaproteobacteria
>WENV180697436
ODDE01000413
3819
Gammaproteobacteria
>WENV180697851
ODDE01007122
275207
Gammaproteobacteria
GGT
Thr
>WENV180697638
ODDE01002006
159481
Gammaproteobacteria
CTT
Lys
>WENV180697643
ODDE01002041
159481
Gammaproteobacteria
CTT
Lys
>WENV180697865
ODDE01007819
160162
Gammaproteobacteria
>WENV180697382
ODDE01000198
159484
Gammaproteobacteria
GAC
Val
>WENV180697902
ODDE01009780
3830
Gammaproteobacteria
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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