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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
18 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180698636
ODDH01048611
412480
Bacteroidota
>WENV180698702
ODDH01090073
246808
Bacteroidota
CTT
Lys
>WENV180698511
ODDH01009296
344824
Bacteroidota
CCG
Arg
>WENV180698487
ODDH01007236
413663
Bacteroidota
CTG
Gln
>WENV180698728
ODDH01110856
128178
Bacteroidota
TAC
Val
>WENV180698701
ODDH01089099
191087
Bacteroidota
TCT
Arg
>WENV180698668
ODDH01066511
60822
Bacteroidota
GAG
Leu
>WENV180698631
ODDH01046034
414526
Bacteroidota
GCA
Cys
>WENV180698635
ODDH01048495
96147
Bacteroidota
TAG
Leu
>WENV180698594
ODDH01030995
296886
Bacteroidota
>WENV180698459
ODDH01002804
148247
Bacteroidota
TGC
Ala
>WENV180698719
ODDH01103476
344769
Bacteroidota
CTC
Glu
>WENV180698703
ODDH01091271
80614
Bacteroidota
>WENV180698665
ODDH01064677
235802
Bacteroidota
CAT
Met
>WENV180698717
ODDH01100680
369111
Bacteroidota
TTC
Glu
>WENV180698464
ODDH01003518
159335
Bacteroidota
GTT
Asn
>WENV180698667
ODDH01066511
300376
Bacteroidota
TTT
Lys
>WENV180698558
ODDH01017456
345164
Bacteroidota
CCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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