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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
24 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180727838
ODGU01013571
152520
Betaproteobacteria
ACG
Arg
>WENV180728614
ODGU01070174
256200
Betaproteobacteria
CGT
Thr
>WENV180727662
ODGU01009262
155690
Betaproteobacteria
TCT
Arg
>WENV180727721
ODGU01010686
97609
Betaproteobacteria
CAA
Leu
>WENV180726557
ODGU01000107
159509
Betaproteobacteria
CAT
Met
>WENV180727109
ODGU01002179
159509
Betaproteobacteria
CAT
Met
>WENV180728465
ODGU01051875
243641
Betaproteobacteria
TAC
Val
>WENV180728889
ODGU01116496
58732
Betaproteobacteria
CAG
Leu
>WENV180727626
ODGU01008625
62536
Betaproteobacteria
CAG
Leu
>WENV180726402
ODGU01000009
62536
Betaproteobacteria
CAG
Leu
>WENV180727577
ODGU01008118
235250
Betaproteobacteria
>WENV180727578
ODGU01008118
235250
Betaproteobacteria
>WENV180729347
ODGU01340324
235250
Betaproteobacteria
>WENV180728510
ODGU01055762
162406
Betaproteobacteria
CAT
Met
>WENV180727385
ODGU01004822
149294
Betaproteobacteria
TCT
Arg
>WENV180727574
ODGU01008073
240188
Betaproteobacteria
GAA
Phe
>WENV180727158
ODGU01002637
155338
Betaproteobacteria
>WENV180727157
ODGU01002637
155338
Betaproteobacteria
>WENV180727156
ODGU01002637
155338
Betaproteobacteria
>WENV180728408
ODGU01047272
352197
Betaproteobacteria
GGT
Thr
>WENV180729095
ODGU01194486
16424
Betaproteobacteria
GGA
Ser
>WENV180727819
ODGU01012959
236872
Betaproteobacteria
CCA
Trp
>WENV180728953
ODGU01130373
238786
Betaproteobacteria
>WENV180727968
ODGU01018401
238786
Betaproteobacteria
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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