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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
37 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180783913
ODIQ01046922
242888
Fusobacteriota
GTT
Asn
>WENV180783933
ODIQ01052966
242888
Fusobacteriota
GTT
Asn
>WENV180784085
ODIQ01128383
242888
Fusobacteriota
GTT
Asn
>WENV180784118
ODIQ01152822
151858
Fusobacteriota
GAT
Ile
>WENV180782811
ODIQ01000216
151860
Fusobacteriota
ACG
Arg
>WENV180783024
ODIQ01001015
151857
Fusobacteriota
TCT
Arg
>WENV180782793
ODIQ01000187
144694
Fusobacteriota
CAT
Met
>WENV180783870
ODIQ01038482
152483
Fusobacteriota
GTC
Asp
>WENV180784067
ODIQ01111812
152483
Fusobacteriota
GTC
Asp
>WENV180784133
ODIQ01174320
246241
Fusobacteriota
TGC
Ala
>WENV180783026
ODIQ01001015
342616
Fusobacteriota
TTC
Glu
>WENV180782910
ODIQ01000398
343015
Fusobacteriota
TTG
Gln
>WENV180783046
ODIQ01001154
242889
Fusobacteriota
TGT
Thr
>WENV180782790
ODIQ01000187
242889
Fusobacteriota
TGT
Thr
>WENV180784076
ODIQ01117769
60218
Fusobacteriota
CAA
Leu
>WENV180782812
ODIQ01000216
60218
Fusobacteriota
CAA
Leu
>WENV180782786
ODIQ01000187
242891
Fusobacteriota
CTT
Lys
>WENV180782792
ODIQ01000187
151855
Fusobacteriota
TGC
Ala
>WENV180783865
ODIQ01038482
243606
Fusobacteriota
TTT
Lys
>WENV180782969
ODIQ01000577
96990
Fusobacteriota
GTA
Tyr
>WENV180783047
ODIQ01001154
342642
Fusobacteriota
TTC
Glu
>WENV180782787
ODIQ01000187
342642
Fusobacteriota
TTC
Glu
>WENV180783025
ODIQ01001015
127801
Fusobacteriota
CAT
Met
>WENV180783869
ODIQ01038482
243607
Fusobacteriota
TAC
Val
>WENV180783235
ODIQ01003080
154976
Fusobacteriota
TCG
Arg
>WENV180783607
ODIQ01012757
242887
Fusobacteriota
GTG
His
>WENV180783608
ODIQ01012757
235188
Fusobacteriota
TTT
Lys
>WENV180783023
ODIQ01001015
235188
Fusobacteriota
TTT
Lys
>WENV180783156
ODIQ01002217
151854
Fusobacteriota
TGG
Pro
>WENV180782831
ODIQ01000234
151854
Fusobacteriota
TGG
Pro
>WENV180782796
ODIQ01000198
37553
Fusobacteriota
GCT
Ser
>WENV180783027
ODIQ01001015
113955
Fusobacteriota
>WENV180783083
ODIQ01001355
246346
Fusobacteriota
TTT
Lys
>WENV180783020
ODIQ01001015
45759
Fusobacteriota
TAA
Leu
>WENV180783609
ODIQ01012757
113605
Fusobacteriota
TAG
Leu
>WENV180782791
ODIQ01000187
113605
Fusobacteriota
TAG
Leu
>WENV180782637
ODIQ01000086
151861
Fusobacteriota
CCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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