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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
71 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180871823
ODLO01000032
235097
Bacteroidota
TTT
Lys
>WENV180871974
ODLO01000322
235097
Bacteroidota
TTT
Lys
>WENV180871849
ODLO01000055
235102
Bacteroidota
CGT
Thr
>WENV180872095
ODLO01000914
243025
Bacteroidota
CAT
Met
>WENV180872040
ODLO01000597
338155
Bacteroidota
CTC
Glu
>WENV180872245
ODLO01002763
17323
Bacteroidota
GGA
Ser
>WENV180871831
ODLO01000035
415410
Bacteroidota
TTG
Gln
>WENV180871943
ODLO01000231
415410
Bacteroidota
TTG
Gln
>WENV180871944
ODLO01000234
415410
Bacteroidota
TTG
Gln
>WENV180872029
ODLO01000535
415410
Bacteroidota
TTG
Gln
>WENV180872082
ODLO01000825
344692
Bacteroidota
GGT
Thr
>WENV180872286
ODLO01005114
145504
Bacteroidota
TGT
Thr
>WENV180872059
ODLO01000724
341950
Bacteroidota
>WENV180871787
ODLO01000004
338124
Bacteroidota
CCG
Arg
>WENV180872164
ODLO01001330
126641
Bacteroidota
TAC
Val
>WENV180872163
ODLO01001330
126641
Bacteroidota
TAC
Val
>WENV180872061
ODLO01000728
338132
Bacteroidota
GCA
Cys
>WENV180872018
ODLO01000484
338132
Bacteroidota
GCA
Cys
>WENV180871955
ODLO01000262
338132
Bacteroidota
GCA
Cys
>WENV180871884
ODLO01000109
338132
Bacteroidota
GCA
Cys
>WENV180872599
ODLO01090208
193809
Bacteroidota
CAT
Met
>WENV180872587
ODLO01085619
235165
Bacteroidota
CCA
Trp
>WENV180872144
ODLO01001251
301449
Bacteroidota
CGG
Pro
>WENV180872079
ODLO01000821
301449
Bacteroidota
CGG
Pro
>WENV180871983
ODLO01000344
301449
Bacteroidota
CGG
Pro
>WENV180871963
ODLO01000286
301449
Bacteroidota
CGG
Pro
>WENV180871869
ODLO01000088
301449
Bacteroidota
CGG
Pro
>WENV180871872
ODLO01000093
144933
Bacteroidota
TCT
Arg
>WENV180871903
ODLO01000161
144656
Bacteroidota
GTG
His
>WENV180871876
ODLO01000099
235207
Bacteroidota
CAT
Met
>WENV180872035
ODLO01000586
144596
Bacteroidota
GGC
Ala
>WENV180871957
ODLO01000265
144596
Bacteroidota
GGC
Ala
>WENV180872494
ODLO01036704
80607
Bacteroidota
GTA
Tyr
>WENV180871824
ODLO01000032
80607
Bacteroidota
GTA
Tyr
>WENV180871779
ODLO01000001
80607
Bacteroidota
GTA
Tyr
>WENV180872602
ODLO01090221
113604
Bacteroidota
>WENV180871916
ODLO01000174
16999
Bacteroidota
GGA
Ser
>WENV180872205
ODLO01001694
52358
Bacteroidota
TGA
Ser
>WENV180872038
ODLO01000589
52358
Bacteroidota
TGA
Ser
>WENV180871949
ODLO01000248
52358
Bacteroidota
TGA
Ser
>WENV180871938
ODLO01000206
52358
Bacteroidota
TGA
Ser
>WENV180871845
ODLO01000052
52358
Bacteroidota
TGA
Ser
>WENV180872049
ODLO01000640
154643
Bacteroidota
CAT
Met
>WENV180871783
ODLO01000001
144590
Bacteroidota
GTT
Asn
>WENV180871782
ODLO01000001
144590
Bacteroidota
GTT
Asn
>WENV180871892
ODLO01000128
95559
Bacteroidota
TAG
Leu
>WENV180871805
ODLO01000012
419272
Bacteroidota
CTG
Gln
>WENV180871840
ODLO01000042
144655
Bacteroidota
GGC
Ala
>WENV180872418
ODLO01018871
263771
Bacteroidota
CTT
Lys
>WENV180871923
ODLO01000179
44852
Bacteroidota
TAA
Leu
>WENV180871777
ODLO01000001
44852
Bacteroidota
TAA
Leu
>WENV180872292
ODLO01005595
147439
Bacteroidota
TCT
Arg
>WENV180872549
ODLO01065312
150485
Bacteroidota
GTT
Asn
>WENV180872140
ODLO01001226
338165
Bacteroidota
GGT
Thr
>WENV180871780
ODLO01000001
338165
Bacteroidota
GGT
Thr
>WENV180872086
ODLO01000879
19528
Bacteroidota
GGA
Ser
>WENV180871986
ODLO01000347
19528
Bacteroidota
GGA
Ser
>WENV180872266
ODLO01003561
132360
Bacteroidota
GGG
Pro
>WENV180871868
ODLO01000084
132360
Bacteroidota
GGG
Pro
>WENV180871860
ODLO01000068
132360
Bacteroidota
GGG
Pro
>WENV180871807
ODLO01000012
132360
Bacteroidota
GGG
Pro
>WENV180872126
ODLO01001127
425638
Bacteroidota
CTG
Gln
>WENV180872074
ODLO01000805
425638
Bacteroidota
CTG
Gln
>WENV180871948
ODLO01000247
425638
Bacteroidota
CTG
Gln
>WENV180871905
ODLO01000163
239647
Bacteroidota
TTT
Lys
>WENV180871973
ODLO01000319
19317
Bacteroidota
GGA
Ser
>WENV180872030
ODLO01000557
414426
Bacteroidota
CTG
Gln
>WENV180871904
ODLO01000161
16224
Bacteroidota
GGA
Ser
>WENV180871806
ODLO01000012
16220
Bacteroidota
GGA
Ser
>WENV180872449
ODLO01023941
338125
Bacteroidota
CCT
Arg
>WENV180871784
ODLO01000001
338125
Bacteroidota
CCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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