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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
27 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180882120
ODMB01015318
339412
Bacteroidota
GGT
Thr
>WENV180882139
ODMB01018295
340029
Bacteroidota
TTC
Glu
>WENV180881914
ODMB01000747
413952
Bacteroidota
>WENV180882143
ODMB01019012
268513
Bacteroidota
TCC
Gly
>WENV180882204
ODMB01048050
320713
Bacteroidota
TTT
Lys
>WENV180882105
ODMB01011696
176247
Bacteroidota
TCT
Arg
>WENV180882235
ODMB01067652
238671
Bacteroidota
TTT
Lys
>WENV180882205
ODMB01048050
60822
Bacteroidota
GAG
Leu
>WENV180882168
ODMB01030474
414526
Bacteroidota
GCA
Cys
>WENV180881975
ODMB01001873
81773
Bacteroidota
CAG
Leu
>WENV180881987
ODMB01002199
148247
Bacteroidota
TGC
Ala
>WENV180881972
ODMB01001779
144639
Bacteroidota
GGC
Ala
>WENV180882002
ODMB01003275
151121
Bacteroidota
CAT
Met
>WENV180882064
ODMB01006781
240012
Bacteroidota
CCC
Gly
>WENV180882097
ODMB01009214
127951
Bacteroidota
TAC
Val
>WENV180882096
ODMB01009214
127951
Bacteroidota
TAC
Val
>WENV180882095
ODMB01009214
127951
Bacteroidota
TAC
Val
>WENV180882148
ODMB01022237
147945
Bacteroidota
CAT
Met
>WENV180882230
ODMB01063160
133943
Bacteroidota
TAC
Val
>WENV180882123
ODMB01016457
128249
Bacteroidota
TGG
Pro
>WENV180882032
ODMB01004506
96124
Bacteroidota
TAG
Leu
>WENV180882215
ODMB01051776
414472
Bacteroidota
TTG
Gln
>WENV180882066
ODMB01007245
302002
Bacteroidota
CGT
Thr
>WENV180882141
ODMB01019012
147941
Bacteroidota
TGT
Thr
>WENV180882049
ODMB01006408
235129
Bacteroidota
GCC
Gly
>WENV180882150
ODMB01022769
345164
Bacteroidota
CCT
Arg
>WENV180882167
ODMB01028731
155341
Bacteroidota
GTG
His
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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