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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
79 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180890103
ODMO01000076
412480
Bacteroidota
>WENV180890139
ODMO01000119
412480
Bacteroidota
>WENV180890970
ODMO01029720
95987
Bacteroidota
CAA
Leu
>WENV180890180
ODMO01000220
141635
Bacteroidota
TAC
Val
>WENV180890234
ODMO01000333
141635
Bacteroidota
TAC
Val
>WENV180890265
ODMO01000491
141635
Bacteroidota
TAC
Val
>WENV180890405
ODMO01001814
141635
Bacteroidota
TAC
Val
>WENV180890486
ODMO01003184
141635
Bacteroidota
TAC
Val
>WENV180890833
ODMO01018072
141635
Bacteroidota
TAC
Val
>WENV180890127
ODMO01000100
339412
Bacteroidota
GGT
Thr
>WENV180890326
ODMO01000847
148097
Bacteroidota
TGG
Pro
>WENV180890136
ODMO01000112
237796
Bacteroidota
CGT
Thr
>WENV180890194
ODMO01000251
237796
Bacteroidota
CGT
Thr
>WENV180890201
ODMO01000258
237796
Bacteroidota
CGT
Thr
>WENV180890198
ODMO01000251
97336
Bacteroidota
CAG
Leu
>WENV180890166
ODMO01000200
340120
Bacteroidota
CCT
Arg
>WENV180890152
ODMO01000144
340120
Bacteroidota
CCT
Arg
>WENV180890039
ODMO01000016
340120
Bacteroidota
CCT
Arg
>WENV180890755
ODMO01013139
24174
Bacteroidota
GCT
Ser
>WENV180890277
ODMO01000552
394247
Bacteroidota
CTC
Glu
>WENV180890124
ODMO01000099
394247
Bacteroidota
CTC
Glu
>WENV180890023
ODMO01000007
394247
Bacteroidota
CTC
Glu
>WENV180890022
ODMO01000007
394247
Bacteroidota
CTC
Glu
>WENV180890434
ODMO01002334
413663
Bacteroidota
CTG
Gln
>WENV180890128
ODMO01000100
237797
Bacteroidota
CCA
Trp
>WENV180890038
ODMO01000014
148096
Bacteroidota
GTG
His
>WENV180890169
ODMO01000202
144695
Bacteroidota
CAT
Met
>WENV180890147
ODMO01000141
144695
Bacteroidota
CAT
Met
>WENV180890769
ODMO01013802
238811
Bacteroidota
CAT
Met
>WENV180890451
ODMO01002647
238811
Bacteroidota
CAT
Met
>WENV180890138
ODMO01000113
238811
Bacteroidota
CAT
Met
>WENV180890184
ODMO01000243
412479
Bacteroidota
TTG
Gln
>WENV180890041
ODMO01000016
412479
Bacteroidota
TTG
Gln
>WENV180890040
ODMO01000016
412479
Bacteroidota
TTG
Gln
>WENV180890596
ODMO01006200
155123
Bacteroidota
GTT
Asn
>WENV180890555
ODMO01004847
155123
Bacteroidota
GTT
Asn
>WENV180890554
ODMO01004847
155123
Bacteroidota
GTT
Asn
>WENV180890294
ODMO01000625
155123
Bacteroidota
GTT
Asn
>WENV180890053
ODMO01000026
238810
Bacteroidota
CGG
Pro
>WENV180890157
ODMO01000152
127253
Bacteroidota
GGG
Pro
>WENV180890131
ODMO01000106
127253
Bacteroidota
GGG
Pro
>WENV180890045
ODMO01000021
127253
Bacteroidota
GGG
Pro
>WENV180890320
ODMO01000840
37076
Bacteroidota
TAA
Leu
>WENV180890151
ODMO01000144
37076
Bacteroidota
TAA
Leu
>WENV180890043
ODMO01000016
37076
Bacteroidota
TAA
Leu
>WENV180890720
ODMO01011264
339634
Bacteroidota
CCT
Arg
>WENV180891251
ODMO01115515
53439
Bacteroidota
TGA
Ser
>WENV180891153
ODMO01070587
136207
Bacteroidota
TAC
Val
>WENV180890495
ODMO01003372
136207
Bacteroidota
TAC
Val
>WENV180890243
ODMO01000350
96147
Bacteroidota
TAG
Leu
>WENV180890233
ODMO01000333
96147
Bacteroidota
TAG
Leu
>WENV180891168
ODMO01076719
412235
Bacteroidota
>WENV180890082
ODMO01000057
147148
Bacteroidota
CAT
Met
>WENV180891006
ODMO01035458
175704
Bacteroidota
TGC
Ala
>WENV180890636
ODMO01007333
175704
Bacteroidota
TGC
Ala
>WENV180890179
ODMO01000213
419272
Bacteroidota
CTG
Gln
>WENV180890159
ODMO01000160
419272
Bacteroidota
CTG
Gln
>WENV180891211
ODMO01096156
151121
Bacteroidota
CAT
Met
>WENV180891077
ODMO01049035
95986
Bacteroidota
GTA
Tyr
>WENV180890489
ODMO01003207
95986
Bacteroidota
GTA
Tyr
>WENV180890408
ODMO01001937
95986
Bacteroidota
GTA
Tyr
>WENV180890406
ODMO01001814
95986
Bacteroidota
GTA
Tyr
>WENV180890266
ODMO01000491
95986
Bacteroidota
GTA
Tyr
>WENV180890126
ODMO01000100
95986
Bacteroidota
GTA
Tyr
>WENV180890114
ODMO01000089
16494
Bacteroidota
GGA
Ser
>WENV180890091
ODMO01000067
16494
Bacteroidota
GGA
Ser
>WENV180890633
ODMO01007169
196394
Bacteroidota
GTC
Asp
>WENV180890217
ODMO01000290
196394
Bacteroidota
GTC
Asp
>WENV180890113
ODMO01000088
196394
Bacteroidota
GTC
Asp
>WENV180890112
ODMO01000088
196394
Bacteroidota
GTC
Asp
>WENV180890196
ODMO01000251
146762
Bacteroidota
TGG
Pro
>WENV180890195
ODMO01000251
412236
Bacteroidota
CCC
Gly
>WENV180890512
ODMO01003658
59498
Bacteroidota
GAG
Leu
>WENV180890199
ODMO01000251
59498
Bacteroidota
GAG
Leu
>WENV180891200
ODMO01088684
313363
Bacteroidota
GAA
Phe
>WENV180890804
ODMO01016181
313363
Bacteroidota
GAA
Phe
>WENV180890307
ODMO01000705
313363
Bacteroidota
GAA
Phe
>WENV180890190
ODMO01000246
313363
Bacteroidota
GAA
Phe
>WENV180890140
ODMO01000119
313363
Bacteroidota
GAA
Phe
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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