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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
16 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180897050
ODNI01005622
411654
Campylobacterota
GCA
Cys
>WENV180897825
ODNI01089102
411654
Campylobacterota
GCA
Cys
>WENV180897051
ODNI01005622
23937
Campylobacterota
TGA
Ser
>WENV180897553
ODNI01037711
238560
Campylobacterota
TTT
Lys
>WENV180897804
ODNI01084971
338276
Campylobacterota
GGT
Thr
>WENV180897324
ODNI01015674
243184
Campylobacterota
GAC
Val
>WENV180897678
ODNI01054688
127212
Campylobacterota
TGG
Pro
>WENV180897557
ODNI01037711
237494
Campylobacterota
CTT
Lys
>WENV180897554
ODNI01037711
238561
Campylobacterota
CTC
Glu
>WENV180897681
ODNI01054688
147836
Campylobacterota
TCT
Arg
>WENV180896570
ODNI01001083
338365
Campylobacterota
GGT
Thr
>WENV180897650
ODNI01049484
146879
Campylobacterota
CAT
Met
>WENV180897348
ODNI01017256
149516
Campylobacterota
CAT
Met
>WENV180897680
ODNI01054688
146881
Campylobacterota
TCG
Arg
>WENV180897049
ODNI01005622
60256
Campylobacterota
TAA
Leu
>WENV180897951
ODNI01144328
339980
Campylobacterota
CAT
Met
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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