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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
41 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180897802
ODNI01084535
242888
Fusobacteriota
GTT
Asn
>WENV180897498
ODNI01032052
151858
Fusobacteriota
GAT
Ile
>WENV180896955
ODNI01004145
151860
Fusobacteriota
ACG
Arg
>WENV180897843
ODNI01097081
151857
Fusobacteriota
TCT
Arg
>WENV180897073
ODNI01006124
144694
Fusobacteriota
CAT
Met
>WENV180896355
ODNI01000405
152483
Fusobacteriota
GTC
Asp
>WENV180896939
ODNI01003874
152483
Fusobacteriota
GTC
Asp
>WENV180897140
ODNI01007241
152483
Fusobacteriota
GTC
Asp
>WENV180897207
ODNI01009578
152483
Fusobacteriota
GTC
Asp
>WENV180897599
ODNI01043703
152483
Fusobacteriota
GTC
Asp
>WENV180897848
ODNI01097467
246241
Fusobacteriota
TGC
Ala
>WENV180897012
ODNI01005015
343015
Fusobacteriota
TTG
Gln
>WENV180896707
ODNI01001708
343015
Fusobacteriota
TTG
Gln
>WENV180897069
ODNI01006124
242889
Fusobacteriota
TGT
Thr
>WENV180896956
ODNI01004145
60218
Fusobacteriota
CAA
Leu
>WENV180897618
ODNI01044847
242891
Fusobacteriota
CTT
Lys
>WENV180897499
ODNI01032052
151855
Fusobacteriota
TGC
Ala
>WENV180897072
ODNI01006124
151855
Fusobacteriota
TGC
Ala
>WENV180897603
ODNI01043703
243606
Fusobacteriota
TTT
Lys
>WENV180897163
ODNI01008024
243606
Fusobacteriota
TTT
Lys
>WENV180896976
ODNI01004344
243606
Fusobacteriota
TTT
Lys
>WENV180896433
ODNI01000647
243606
Fusobacteriota
TTT
Lys
>WENV180896227
ODNI01000216
243606
Fusobacteriota
TTT
Lys
>WENV180897941
ODNI01140355
96990
Fusobacteriota
GTA
Tyr
>WENV180897619
ODNI01044847
342642
Fusobacteriota
TTC
Glu
>WENV180897844
ODNI01097081
127801
Fusobacteriota
CAT
Met
>WENV180897598
ODNI01043703
243607
Fusobacteriota
TAC
Val
>WENV180897206
ODNI01009578
243607
Fusobacteriota
TAC
Val
>WENV180896354
ODNI01000405
243607
Fusobacteriota
TAC
Val
>WENV180897492
ODNI01030238
154976
Fusobacteriota
TCG
Arg
>WENV180897675
ODNI01053518
235188
Fusobacteriota
TTT
Lys
>WENV180897762
ODNI01075346
151854
Fusobacteriota
TGG
Pro
>WENV180897227
ODNI01010520
151854
Fusobacteriota
TGG
Pro
>WENV180897079
ODNI01006255
37553
Fusobacteriota
GCT
Ser
>WENV180897932
ODNI01136396
113955
Fusobacteriota
>WENV180897672
ODNI01053518
45759
Fusobacteriota
TAA
Leu
>WENV180896432
ODNI01000647
243596
Fusobacteriota
GTG
His
>WENV180896226
ODNI01000216
243596
Fusobacteriota
GTG
His
>WENV180897337
ODNI01016686
113605
Fusobacteriota
TAG
Leu
>WENV180897070
ODNI01006124
113605
Fusobacteriota
TAG
Leu
>WENV180897272
ODNI01012139
151861
Fusobacteriota
CCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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