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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
22 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180998872
ODVT01002689
411654
Campylobacterota
GCA
Cys
>WENV180999031
ODVT01004908
411654
Campylobacterota
GCA
Cys
>WENV180999032
ODVT01004908
23937
Campylobacterota
TGA
Ser
>WENV180999807
ODVT01072744
170960
Campylobacterota
TCG
Arg
>WENV180998873
ODVT01002689
44891
Campylobacterota
TGA
Ser
>WENV180999026
ODVT01004862
193571
Campylobacterota
CAT
Met
>WENV180998660
ODVT01001121
20245
Campylobacterota
GCT
Ser
>WENV180999614
ODVT01037802
20245
Campylobacterota
GCT
Ser
>WENV180999968
ODVT01123711
238560
Campylobacterota
TTT
Lys
>WENV180998893
ODVT01002914
243184
Campylobacterota
GAC
Val
>WENV180998641
ODVT01001064
243184
Campylobacterota
GAC
Val
>WENV180999805
ODVT01072744
127212
Campylobacterota
TGG
Pro
>WENV180999618
ODVT01038975
162606
Campylobacterota
CCT
Arg
>WENV180999275
ODVT01011022
338365
Campylobacterota
GGT
Thr
>WENV180998425
ODVT01000342
338365
Campylobacterota
GGT
Thr
>WENV180999666
ODVT01045093
353400
Campylobacterota
CTC
Glu
>WENV180999438
ODVT01019082
146879
Campylobacterota
CAT
Met
>WENV180998655
ODVT01001109
146879
Campylobacterota
CAT
Met
>WENV180998423
ODVT01000342
95644
Campylobacterota
GTA
Tyr
>WENV180998420
ODVT01000334
149516
Campylobacterota
CAT
Met
>WENV180999030
ODVT01004908
60256
Campylobacterota
TAA
Leu
>WENV180998474
ODVT01000477
145013
Campylobacterota
TCG
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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