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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
16 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181029783
ODXF01003975
81880
Gammaproteobacteria
GAG
Leu
>WENV181029138
ODXF01000001
246818
Gammaproteobacteria
TTT
Lys
>WENV181029931
ODXF01010629
238438
Gammaproteobacteria
>WENV181030285
ODXF01128975
103428
Gammaproteobacteria
TAG
Leu
>WENV181029640
ODXF01001408
3276
Gammaproteobacteria
>WENV181030231
ODXF01091664
145168
Gammaproteobacteria
CAT
Met
>WENV181030114
ODXF01038474
375391
Gammaproteobacteria
TTG
Gln
>WENV181029952
ODXF01012825
413551
Gammaproteobacteria
CCA
Trp
>WENV181029698
ODXF01002137
292044
Gammaproteobacteria
GTG
His
>WENV181030215
ODXF01082827
339913
Gammaproteobacteria
TTT
Lys
>WENV181029538
ODXF01000626
254333
Gammaproteobacteria
TGT
Thr
>WENV181030276
ODXF01119522
3278
Gammaproteobacteria
>WENV181029726
ODXF01002479
268376
Gammaproteobacteria
CTT
Lys
>WENV181029699
ODXF01002137
147761
Gammaproteobacteria
TGG
Pro
>WENV181029616
ODXF01001058
147761
Gammaproteobacteria
TGG
Pro
>WENV181029593
ODXF01000908
24813
Gammaproteobacteria
TGA
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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