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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
46 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181031052
ODXJ01079073
196621
Bacillota
GTC
Asp
>WENV181031074
ODXJ01094210
202812
Bacillota
CAT
Met
>WENV181030790
ODXJ01005442
309417
Bacillota
GGC
Ala
>WENV181030916
ODXJ01027761
144612
Bacillota
TCT
Arg
>WENV181030993
ODXJ01051620
235098
Bacillota
GAC
Val
>WENV181030802
ODXJ01005950
148239
Bacillota
TCT
Arg
>WENV181030920
ODXJ01028470
44854
Bacillota
TGA
Ser
>WENV181031075
ODXJ01095879
144577
Bacillota
GAT
Ile
>WENV181030841
ODXJ01009220
37071
Bacillota
TGA
Ser
>WENV181030854
ODXJ01011006
246023
Bacillota
TGC
Ala
>WENV181031032
ODXJ01066958
307003
Bacillota
TGC
Ala
>WENV181030872
ODXJ01015260
59312
Bacillota
CAG
Leu
>WENV181030728
ODXJ01002471
338147
Bacillota
CTC
Glu
>WENV181030876
ODXJ01015808
235150
Bacillota
TGC
Ala
>WENV181030942
ODXJ01033716
235137
Bacillota
TGC
Ala
>WENV181031099
ODXJ01113882
340802
Bacillota
TTG
Gln
>WENV181030906
ODXJ01026087
341763
Bacillota
CTC
Glu
>WENV181030878
ODXJ01016366
198770
Bacillota
GTC
Asp
>WENV181030981
ODXJ01042983
429429
Bacillota
CCA
Trp
>WENV181030847
ODXJ01009921
429429
Bacillota
CCA
Trp
>WENV181030932
ODXJ01031117
313454
Bacillota
GAA
Phe
>WENV181030774
ODXJ01004725
313454
Bacillota
GAA
Phe
>WENV181030846
ODXJ01009883
44859
Bacillota
AAG
Leu
>WENV181031055
ODXJ01080860
287000
Bacillota
GTT
Asn
>WENV181031002
ODXJ01056021
413152
Bacillota
TCC
Gly
>WENV181030853
ODXJ01011006
201704
Bacillota
GAT
Ile
>WENV181031101
ODXJ01117948
100326
Bacillota
GTA
Tyr
>WENV181030803
ODXJ01005950
144610
Bacillota
GTG
His
>WENV181031000
ODXJ01055586
411547
Bacillota
CTG
Gln
>WENV181031013
ODXJ01059552
411549
Bacillota
TTG
Gln
>WENV181030819
ODXJ01006834
245386
Bacillota
CCA
Trp
>WENV181030890
ODXJ01020707
148188
Bacillota
CCG
Arg
>WENV181031027
ODXJ01064591
80612
Bacillota
GTA
Tyr
>WENV181030983
ODXJ01044874
147674
Bacillota
TCT
Arg
>WENV181031016
ODXJ01060651
235124
Bacillota
TGG
Pro
>WENV181031043
ODXJ01072691
338129
Bacillota
TGT
Thr
>WENV181030931
ODXJ01031117
157838
Bacillota
GTC
Asp
>WENV181030907
ODXJ01026332
320668
Bacillota
CTT
Lys
>WENV181031042
ODXJ01072116
419877
Bacillota
TCC
Gly
>WENV181031093
ODXJ01107136
238974
Bacillota
GAA
Phe
>WENV181030871
ODXJ01015025
235113
Bacillota
GAA
Phe
>WENV181030939
ODXJ01033273
58712
Bacillota
CAG
Leu
>WENV181031053
ODXJ01079714
245296
Bacillota
CCC
Gly
>WENV181031104
ODXJ01118009
272992
Bacillota
CTT
Lys
>WENV181030749
ODXJ01003566
414486
Bacillota
CCC
Gly
>WENV181030976
ODXJ01041615
338128
Bacillota
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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