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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
42 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181045826
ODXW01001935
159267
Fusobacteriota
CAT
Met
>WENV181045605
ODXW01000678
242888
Fusobacteriota
GTT
Asn
>WENV181045944
ODXW01003675
242888
Fusobacteriota
GTT
Asn
>WENV181046138
ODXW01009009
151858
Fusobacteriota
GAT
Ile
>WENV181045750
ODXW01001445
151857
Fusobacteriota
TCT
Arg
>WENV181046199
ODXW01011769
156827
Fusobacteriota
GTC
Asp
>WENV181045268
ODXW01000037
152483
Fusobacteriota
GTC
Asp
>WENV181045462
ODXW01000265
152483
Fusobacteriota
GTC
Asp
>WENV181046370
ODXW01025816
342616
Fusobacteriota
TTC
Glu
>WENV181045230
ODXW01000028
248600
Fusobacteriota
GTG
His
>WENV181045576
ODXW01000565
343015
Fusobacteriota
TTG
Gln
>WENV181046161
ODXW01010368
242889
Fusobacteriota
TGT
Thr
>WENV181046039
ODXW01005567
60218
Fusobacteriota
CAA
Leu
>WENV181046375
ODXW01025816
242891
Fusobacteriota
CTT
Lys
>WENV181046139
ODXW01009009
151855
Fusobacteriota
TGC
Ala
>WENV181045825
ODXW01001935
151855
Fusobacteriota
TGC
Ala
>WENV181045244
ODXW01000030
243606
Fusobacteriota
TTT
Lys
>WENV181045236
ODXW01000030
243606
Fusobacteriota
TTT
Lys
>WENV181045231
ODXW01000028
243606
Fusobacteriota
TTT
Lys
>WENV181045751
ODXW01001445
127801
Fusobacteriota
CAT
Met
>WENV181045461
ODXW01000265
243607
Fusobacteriota
TAC
Val
>WENV181045267
ODXW01000037
243607
Fusobacteriota
TAC
Val
>WENV181045511
ODXW01000341
154976
Fusobacteriota
TCG
Arg
>WENV181046374
ODXW01025816
267548
Fusobacteriota
TCC
Gly
>WENV181045748
ODXW01001445
267548
Fusobacteriota
TCC
Gly
>WENV181045674
ODXW01000988
267548
Fusobacteriota
TCC
Gly
>WENV181045864
ODXW01002349
255856
Fusobacteriota
TGT
Thr
>WENV181045463
ODXW01000265
255856
Fusobacteriota
TGT
Thr
>WENV181045675
ODXW01000988
242887
Fusobacteriota
GTG
His
>WENV181045827
ODXW01001935
151854
Fusobacteriota
TGG
Pro
>WENV181045673
ODXW01000988
151854
Fusobacteriota
TGG
Pro
>WENV181045749
ODXW01001445
248546
Fusobacteriota
TTT
Lys
>WENV181045676
ODXW01000988
248546
Fusobacteriota
TTT
Lys
>WENV181046373
ODXW01025816
415120
Fusobacteriota
GCA
Cys
>WENV181045655
ODXW01000909
37553
Fusobacteriota
GCT
Ser
>WENV181046371
ODXW01025816
113955
Fusobacteriota
>WENV181045746
ODXW01001445
45759
Fusobacteriota
TAA
Leu
>WENV181045824
ODXW01001935
113605
Fusobacteriota
TAG
Leu
>WENV181045677
ODXW01000988
113605
Fusobacteriota
TAG
Leu
>WENV181046376
ODXW01025816
346237
Fusobacteriota
TTC
Glu
>WENV181045618
ODXW01000747
346237
Fusobacteriota
TTC
Glu
>WENV181045732
ODXW01001300
151861
Fusobacteriota
CCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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