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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
38 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181097005
OECA01001562
314498
Actinomycetota
GGC
Ala
>WENV181097894
OECA01040402
314498
Actinomycetota
GGC
Ala
>WENV181096723
OECA01000190
261773
Actinomycetota
CCT
Arg
>WENV181097097
OECA01002201
158373
Actinomycetota
GGG
Pro
>WENV181096890
OECA01000750
161605
Actinomycetota
CAT
Met
>WENV181097343
OECA01006417
241401
Actinomycetota
CCA
Trp
>WENV181098152
OECA01100424
235610
Actinomycetota
TGT
Thr
>WENV181098144
OECA01097573
145052
Actinomycetota
GAT
Ile
>WENV181097180
OECA01003451
150473
Actinomycetota
CTC
Glu
>WENV181097209
OECA01003724
149271
Actinomycetota
CAT
Met
>WENV181096969
OECA01001304
246015
Actinomycetota
GTG
His
>WENV181097191
OECA01003645
239204
Actinomycetota
CTT
Lys
>WENV181097152
OECA01002939
239204
Actinomycetota
CTT
Lys
>WENV181097098
OECA01002280
392594
Actinomycetota
GAC
Val
>WENV181096897
OECA01000871
392594
Actinomycetota
GAC
Val
>WENV181096874
OECA01000679
392594
Actinomycetota
GAC
Val
>WENV181097786
OECA01026419
148467
Actinomycetota
CAT
Met
>WENV181097785
OECA01026419
148467
Actinomycetota
CAT
Met
>WENV181097062
OECA01001885
246299
Actinomycetota
CTT
Lys
>WENV181097061
OECA01001885
246299
Actinomycetota
CTT
Lys
>WENV181097096
OECA01002197
246222
Actinomycetota
CCG
Arg
>WENV181097159
OECA01003007
42714
Actinomycetota
GAG
Leu
>WENV181096779
OECA01000275
152190
Actinomycetota
GAT
Ile
>WENV181097529
OECA01011167
162402
Actinomycetota
GGG
Pro
>WENV181097109
OECA01002500
162402
Actinomycetota
GGG
Pro
>WENV181097058
OECA01001847
162402
Actinomycetota
GGG
Pro
>WENV181098193
OECA01132130
287977
Actinomycetota
GTG
His
>WENV181098130
OECA01092602
300377
Actinomycetota
CTT
Lys
>WENV181097932
OECA01046384
293092
Actinomycetota
CTC
Glu
>WENV181097154
OECA01002973
59716
Actinomycetota
CAG
Leu
>WENV181097131
OECA01002720
246365
Actinomycetota
ACG
Arg
>WENV181098145
OECA01097573
322982
Actinomycetota
TGC
Ala
>WENV181098254
OECA01168226
240124
Actinomycetota
CGT
Thr
>WENV181097509
OECA01010998
240124
Actinomycetota
CGT
Thr
>WENV181096900
OECA01000871
388111
Actinomycetota
>WENV181097702
OECA01021290
344380
Actinomycetota
GAC
Val
>WENV181096995
OECA01001473
412870
Actinomycetota
TCC
Gly
>WENV181097585
OECA01014950
241408
Actinomycetota
CTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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