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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
73 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181124655
OEFT01000439
412480
Bacteroidota
>WENV181124785
OEFT01002021
412480
Bacteroidota
>WENV181124853
OEFT01003279
95987
Bacteroidota
CAA
Leu
>WENV181124656
OEFT01000441
339412
Bacteroidota
GGT
Thr
>WENV181124761
OEFT01001471
148097
Bacteroidota
TGG
Pro
>WENV181124488
OEFT01000004
237796
Bacteroidota
CGT
Thr
>WENV181124647
OEFT01000337
237796
Bacteroidota
CGT
Thr
>WENV181124865
OEFT01003671
237796
Bacteroidota
CGT
Thr
>WENV181124881
OEFT01004054
237796
Bacteroidota
CGT
Thr
>WENV181125417
OEFT01095826
416430
Bacteroidota
GCA
Cys
>WENV181124504
OEFT01000019
97336
Bacteroidota
CAG
Leu
>WENV181125303
OEFT01047202
340120
Bacteroidota
CCT
Arg
>WENV181124624
OEFT01000277
340120
Bacteroidota
CCT
Arg
>WENV181124551
OEFT01000078
340120
Bacteroidota
CCT
Arg
>WENV181124513
OEFT01000028
340120
Bacteroidota
CCT
Arg
>WENV181124623
OEFT01000271
413663
Bacteroidota
CTG
Gln
>WENV181124657
OEFT01000441
237797
Bacteroidota
CCA
Trp
>WENV181124762
OEFT01001485
148096
Bacteroidota
GTG
His
>WENV181124681
OEFT01000573
148096
Bacteroidota
GTG
His
>WENV181124666
OEFT01000485
148096
Bacteroidota
GTG
His
>WENV181124651
OEFT01000378
148096
Bacteroidota
GTG
His
>WENV181124645
OEFT01000320
144695
Bacteroidota
CAT
Met
>WENV181125223
OEFT01028857
238811
Bacteroidota
CAT
Met
>WENV181124630
OEFT01000282
238811
Bacteroidota
CAT
Met
>WENV181124522
OEFT01000034
238811
Bacteroidota
CAT
Met
>WENV181124957
OEFT01006471
412479
Bacteroidota
TTG
Gln
>WENV181124773
OEFT01001635
412479
Bacteroidota
TTG
Gln
>WENV181124661
OEFT01000456
412479
Bacteroidota
TTG
Gln
>WENV181124660
OEFT01000456
412479
Bacteroidota
TTG
Gln
>WENV181124514
OEFT01000028
412479
Bacteroidota
TTG
Gln
>WENV181124840
OEFT01003000
155123
Bacteroidota
GTT
Asn
>WENV181124700
OEFT01000829
155123
Bacteroidota
GTT
Asn
>WENV181124534
OEFT01000042
155123
Bacteroidota
GTT
Asn
>WENV181125495
OEFT01143459
353373
Bacteroidota
>WENV181124549
OEFT01000076
238810
Bacteroidota
CGG
Pro
>WENV181124499
OEFT01000014
238810
Bacteroidota
CGG
Pro
>WENV181125247
OEFT01032343
127253
Bacteroidota
GGG
Pro
>WENV181124809
OEFT01002519
127253
Bacteroidota
GGG
Pro
>WENV181124704
OEFT01000893
127253
Bacteroidota
GGG
Pro
>WENV181124927
OEFT01005663
37076
Bacteroidota
TAA
Leu
>WENV181124680
OEFT01000563
37076
Bacteroidota
TAA
Leu
>WENV181124613
OEFT01000204
37076
Bacteroidota
TAA
Leu
>WENV181124550
OEFT01000078
37076
Bacteroidota
TAA
Leu
>WENV181125439
OEFT01111295
60822
Bacteroidota
GAG
Leu
>WENV181125209
OEFT01025535
339634
Bacteroidota
CCT
Arg
>WENV181125438
OEFT01110871
171336
Bacteroidota
GGC
Ala
>WENV181125321
OEFT01050751
96109
Bacteroidota
TAG
Leu
>WENV181124950
OEFT01006236
96147
Bacteroidota
TAG
Leu
>WENV181124949
OEFT01006235
96147
Bacteroidota
TAG
Leu
>WENV181124687
OEFT01000654
96147
Bacteroidota
TAG
Leu
>WENV181125275
OEFT01039956
148247
Bacteroidota
TGC
Ala
>WENV181124597
OEFT01000157
344769
Bacteroidota
CTC
Glu
>WENV181124596
OEFT01000157
344769
Bacteroidota
CTC
Glu
>WENV181124574
OEFT01000093
344769
Bacteroidota
CTC
Glu
>WENV181124573
OEFT01000093
344769
Bacteroidota
CTC
Glu
>WENV181124572
OEFT01000093
344769
Bacteroidota
CTC
Glu
>WENV181125227
OEFT01029362
339996
Bacteroidota
TTC
Glu
>WENV181124498
OEFT01000011
147148
Bacteroidota
CAT
Met
>WENV181125293
OEFT01044729
175704
Bacteroidota
TGC
Ala
>WENV181125246
OEFT01031967
175704
Bacteroidota
TGC
Ala
>WENV181124607
OEFT01000183
419272
Bacteroidota
CTG
Gln
>WENV181125416
OEFT01095300
95986
Bacteroidota
GTA
Tyr
>WENV181125074
OEFT01011862
95986
Bacteroidota
GTA
Tyr
>WENV181124867
OEFT01003680
95986
Bacteroidota
GTA
Tyr
>WENV181124508
OEFT01000019
95986
Bacteroidota
GTA
Tyr
>WENV181124727
OEFT01001121
16494
Bacteroidota
GGA
Ser
>WENV181124510
OEFT01000024
16494
Bacteroidota
GGA
Ser
>WENV181124502
OEFT01000019
146762
Bacteroidota
TGG
Pro
>WENV181124648
OEFT01000337
412236
Bacteroidota
CCC
Gly
>WENV181125440
OEFT01112562
59498
Bacteroidota
GAG
Leu
>WENV181125217
OEFT01028536
59498
Bacteroidota
GAG
Leu
>WENV181124505
OEFT01000019
59498
Bacteroidota
GAG
Leu
>WENV181125391
OEFT01087253
414472
Bacteroidota
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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