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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
20 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181137363
OEGJ01002239
411654
Campylobacterota
GCA
Cys
>WENV181137922
OEGJ01044251
411654
Campylobacterota
GCA
Cys
>WENV181137848
OEGJ01035130
170960
Campylobacterota
TCG
Arg
>WENV181137998
OEGJ01068299
44891
Campylobacterota
TGA
Ser
>WENV181137595
OEGJ01008022
193571
Campylobacterota
CAT
Met
>WENV181137307
OEGJ01001661
20245
Campylobacterota
GCT
Ser
>WENV181137826
OEGJ01032886
238560
Campylobacterota
TTT
Lys
>WENV181137619
OEGJ01009587
243184
Campylobacterota
GAC
Val
>WENV181137846
OEGJ01035130
127212
Campylobacterota
TGG
Pro
>WENV181137768
OEGJ01023026
162606
Campylobacterota
CCT
Arg
>WENV181137834
OEGJ01033020
338365
Campylobacterota
GGT
Thr
>WENV181137615
OEGJ01009477
338365
Campylobacterota
GGT
Thr
>WENV181137858
OEGJ01036360
353400
Campylobacterota
CTC
Glu
>WENV181137827
OEGJ01032886
298002
Campylobacterota
>WENV181137569
OEGJ01007168
146879
Campylobacterota
CAT
Met
>WENV181137613
OEGJ01009477
95644
Campylobacterota
GTA
Tyr
>WENV181137555
OEGJ01006638
149516
Campylobacterota
CAT
Met
>WENV181138182
OEGJ01152944
60256
Campylobacterota
TAA
Leu
>WENV181137362
OEGJ01002239
60256
Campylobacterota
TAA
Leu
>WENV181137817
OEGJ01030889
145013
Campylobacterota
TCG
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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