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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
20 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181137041
OEGJ01000061
81880
Gammaproteobacteria
GAG
Leu
>WENV181137110
OEGJ01000268
30640
Gammaproteobacteria
GGA
Ser
>WENV181137284
OEGJ01001425
238438
Gammaproteobacteria
>WENV181137285
OEGJ01001425
238438
Gammaproteobacteria
>WENV181137218
OEGJ01000808
103428
Gammaproteobacteria
TAG
Leu
>WENV181137323
OEGJ01001913
3276
Gammaproteobacteria
>WENV181137022
OEGJ01000032
145168
Gammaproteobacteria
CAT
Met
>WENV181137806
OEGJ01029750
150561
Gammaproteobacteria
ACG
Arg
>WENV181137926
OEGJ01045107
339913
Gammaproteobacteria
TTT
Lys
>WENV181137118
OEGJ01000301
195299
Gammaproteobacteria
CAT
Met
>WENV181137163
OEGJ01000539
358575
Gammaproteobacteria
TCC
Gly
>WENV181137570
OEGJ01007209
8480
Gammaproteobacteria
GCT
Ser
>WENV181137035
OEGJ01000057
3278
Gammaproteobacteria
>WENV181137500
OEGJ01005146
147498
Gammaproteobacteria
GAC
Val
>WENV181137046
OEGJ01000074
268376
Gammaproteobacteria
CTT
Lys
>WENV181137203
OEGJ01000737
147761
Gammaproteobacteria
TGG
Pro
>WENV181137135
OEGJ01000392
147761
Gammaproteobacteria
TGG
Pro
>WENV181137009
OEGJ01000025
90409
Gammaproteobacteria
CAA
Leu
>WENV181137051
OEGJ01000091
147499
Gammaproteobacteria
CTT
Lys
>WENV181137066
OEGJ01000154
24813
Gammaproteobacteria
TGA
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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