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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
34 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181159039
OEIH01033661
81880
Gammaproteobacteria
GAG
Leu
>WENV181158166
OEIH01000002
246818
Gammaproteobacteria
TTT
Lys
>WENV181158260
OEIH01000123
340342
Gammaproteobacteria
TTG
Gln
>WENV181158261
OEIH01000123
340342
Gammaproteobacteria
TTG
Gln
>WENV181158519
OEIH01002151
238438
Gammaproteobacteria
>WENV181159159
OEIH01070730
3276
Gammaproteobacteria
>WENV181158279
OEIH01000175
80672
Gammaproteobacteria
GAG
Leu
>WENV181158799
OEIH01009980
145168
Gammaproteobacteria
CAT
Met
>WENV181158276
OEIH01000164
145168
Gammaproteobacteria
CAT
Met
>WENV181158193
OEIH01000007
23436
Gammaproteobacteria
GGA
Ser
>WENV181159374
OEIH01205290
150561
Gammaproteobacteria
ACG
Arg
>WENV181158278
OEIH01000174
413551
Gammaproteobacteria
CCA
Trp
>WENV181158546
OEIH01002696
339913
Gammaproteobacteria
TTT
Lys
>WENV181158202
OEIH01000017
3247
Gammaproteobacteria
GCT
Ser
>WENV181158277
OEIH01000172
58828
Gammaproteobacteria
TAA
Leu
>WENV181158253
OEIH01000093
58828
Gammaproteobacteria
TAA
Leu
>WENV181158249
OEIH01000083
58828
Gammaproteobacteria
TAA
Leu
>WENV181158499
OEIH01001911
3278
Gammaproteobacteria
>WENV181158256
OEIH01000099
3278
Gammaproteobacteria
>WENV181159051
OEIH01035599
240084
Gammaproteobacteria
GGT
Thr
>WENV181158461
OEIH01001626
147498
Gammaproteobacteria
GAC
Val
>WENV181158504
OEIH01001944
148834
Gammaproteobacteria
CAT
Met
>WENV181159251
OEIH01119599
147761
Gammaproteobacteria
TGG
Pro
>WENV181158413
OEIH01001118
147761
Gammaproteobacteria
TGG
Pro
>WENV181158234
OEIH01000054
147761
Gammaproteobacteria
TGG
Pro
>WENV181158228
OEIH01000050
147761
Gammaproteobacteria
TGG
Pro
>WENV181159232
OEIH01110647
152293
Gammaproteobacteria
ACG
Arg
>WENV181158757
OEIH01008914
147499
Gammaproteobacteria
CTT
Lys
>WENV181158210
OEIH01000021
147499
Gammaproteobacteria
CTT
Lys
>WENV181158305
OEIH01000287
24813
Gammaproteobacteria
TGA
Ser
>WENV181158803
OEIH01010312
237306
Gammaproteobacteria
GAA
Phe
>WENV181158700
OEIH01006449
237306
Gammaproteobacteria
GAA
Phe
>WENV181158322
OEIH01000378
237306
Gammaproteobacteria
GAA
Phe
>WENV181158244
OEIH01000068
237306
Gammaproteobacteria
GAA
Phe
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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