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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
45 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181194666
OEQR01000270
24650
Bacillota
TAA
Leu
>WENV181194656
OEQR01000152
196621
Bacillota
GTC
Asp
>WENV181194683
OEQR01000506
144612
Bacillota
TCT
Arg
>WENV181194651
OEQR01000093
235098
Bacillota
GAC
Val
>WENV181194740
OEQR01002295
144577
Bacillota
GAT
Ile
>WENV181194677
OEQR01000308
304022
Bacillota
GCC
Gly
>WENV181194748
OEQR01002663
304022
Bacillota
GCC
Gly
>WENV181194923
OEQR01018987
429443
Bacillota
GCA
Cys
>WENV181194911
OEQR01017402
307003
Bacillota
TGC
Ala
>WENV181194750
OEQR01002670
293599
Bacillota
CTT
Lys
>WENV181194849
OEQR01007935
361897
Bacillota
CTC
Glu
>WENV181194908
OEQR01016964
429429
Bacillota
CCA
Trp
>WENV181194735
OEQR01002084
274189
Bacillota
TGT
Thr
>WENV181194747
OEQR01002663
235079
Bacillota
GAA
Phe
>WENV181194676
OEQR01000308
235079
Bacillota
GAA
Phe
>WENV181194739
OEQR01002295
235087
Bacillota
TGC
Ala
>WENV181194726
OEQR01001839
338149
Bacillota
CTC
Glu
>WENV181194674
OEQR01000289
338149
Bacillota
CTC
Glu
>WENV181194872
OEQR01010102
287000
Bacillota
GTT
Asn
>WENV181194669
OEQR01000270
144610
Bacillota
GTG
His
>WENV181194703
OEQR01001165
411547
Bacillota
CTG
Gln
>WENV181194692
OEQR01000702
411547
Bacillota
CTG
Gln
>WENV181194937
OEQR01023384
147684
Bacillota
ACG
Arg
>WENV181194657
OEQR01000152
235095
Bacillota
GGT
Thr
>WENV181194654
OEQR01000127
235095
Bacillota
GGT
Thr
>WENV181194696
OEQR01000835
411549
Bacillota
TTG
Gln
>WENV181194950
OEQR01026341
298639
Bacillota
GTT
Asn
>WENV181194681
OEQR01000462
80612
Bacillota
GTA
Tyr
>WENV181194680
OEQR01000403
80612
Bacillota
GTA
Tyr
>WENV181194673
OEQR01000275
235124
Bacillota
TGG
Pro
>WENV181194652
OEQR01000098
338129
Bacillota
TGT
Thr
>WENV181194649
OEQR01000062
338129
Bacillota
TGT
Thr
>WENV181194720
OEQR01001594
144583
Bacillota
ACG
Arg
>WENV181194702
OEQR01001147
235171
Bacillota
CCA
Trp
>WENV181194655
OEQR01000152
235171
Bacillota
CCA
Trp
>WENV181194727
OEQR01001839
144621
Bacillota
GTT
Asn
>WENV181194675
OEQR01000289
144621
Bacillota
GTT
Asn
>WENV181194717
OEQR01001445
58712
Bacillota
CAG
Leu
>WENV181194699
OEQR01001030
245296
Bacillota
CCC
Gly
>WENV181194765
OEQR01003014
272992
Bacillota
CTT
Lys
>WENV181194783
OEQR01003883
198135
Bacillota
GAT
Ile
>WENV181194782
OEQR01003883
299139
Bacillota
TGC
Ala
>WENV181194650
OEQR01000066
144594
Bacillota
CAC
Val
>WENV181194863
OEQR01009633
272488
Bacillota
GAA
Phe
>WENV181194695
OEQR01000771
338128
Bacillota
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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