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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
20 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181206897
OFAX01000514
238673
Bacteroidota
GAA
Phe
>WENV181206974
OFAX01009174
146962
Bacteroidota
CAT
Met
>WENV181206926
OFAX01003092
349704
Bacteroidota
>WENV181206965
OFAX01007329
165001
Bacteroidota
GTT
Asn
>WENV181206941
OFAX01004148
61800
Bacteroidota
TAA
Leu
>WENV181206906
OFAX01001251
147942
Bacteroidota
GTC
Asp
>WENV181206956
OFAX01006306
349706
Bacteroidota
TTC
Glu
>WENV181206903
OFAX01001129
49158
Bacteroidota
GCT
Ser
>WENV181206885
OFAX01000210
268513
Bacteroidota
TCC
Gly
>WENV181206931
OFAX01003484
168744
Bacteroidota
GTG
His
>WENV181206884
OFAX01000210
113760
Bacteroidota
GTA
Tyr
>WENV181206934
OFAX01003542
253726
Bacteroidota
>WENV181206925
OFAX01003092
162423
Bacteroidota
TTT
Lys
>WENV181206905
OFAX01001129
176247
Bacteroidota
TCT
Arg
>WENV181206886
OFAX01000269
412441
Bacteroidota
TTG
Gln
>WENV181206898
OFAX01000592
48896
Bacteroidota
>WENV181206940
OFAX01004148
96124
Bacteroidota
TAG
Leu
>WENV181206920
OFAX01002487
340028
Bacteroidota
TTC
Glu
>WENV181206909
OFAX01001282
179613
Bacteroidota
CAT
Met
>WENV181206883
OFAX01000210
147941
Bacteroidota
TGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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