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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
12 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181207529
OFAZ01001845
155988
Campylobacterota
TCT
Arg
>WENV181207613
OFAZ01006647
178762
Campylobacterota
GCC
Gly
>WENV181207367
OFAZ01000008
155979
Campylobacterota
TCC
Gly
>WENV181207631
OFAZ01008553
152142
Campylobacterota
GAT
Ile
>WENV181207632
OFAZ01008568
152142
Campylobacterota
GAT
Ile
>WENV181207633
OFAZ01008568
243220
Campylobacterota
TGC
Ala
>WENV181207405
OFAZ01000077
149516
Campylobacterota
CAT
Met
>WENV181207359
OFAZ01000006
154128
Campylobacterota
TGT
Thr
>WENV181207382
OFAZ01000023
155980
Campylobacterota
GTC
Asp
>WENV181207377
OFAZ01000023
155980
Campylobacterota
GTC
Asp
>WENV181207381
OFAZ01000023
247550
Campylobacterota
TAC
Val
>WENV181207379
OFAZ01000023
247550
Campylobacterota
TAC
Val
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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